RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 EPHB1P54762 984 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 HADHBP55084 474 aaKnown RBP11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 CLDN6P56747 220 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 DSC2Q02487 901 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 PPIDQ08752 370 aaKnown RBP11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 PDK1Q15118 436 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 CNGA3Q16281 694 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 ALG11Q2TAA5 492 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 SLC9A4Q6AI14 798 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 ALG1LQ6GMV1 187 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 ESRP1Q6NXG1 681 aaKnown RBP11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 RFX6Q8HWS3 928 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 CACTIN-AS1Q8N1I8 211 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 Q8N3U1 123 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 SDR16C5Q8N3Y7 309 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 FSTL5Q8N475 847 aaPredicted RBP11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 PLD5Q8N7P1 536 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 MDM1Q8TC05 714 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 SCG3Q8WXD2 468 aaKnown RBP11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 FUBP1Q96AE4 644 aaKnown RBP11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 PANX2Q96RD6 677 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 MCCC1Q96RQ3 725 aaPredicted RBP11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 LGMNQ99538 433 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 LRRC61Q9BV99 259 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 CLPBQ9H078 707 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 KLQ9UEF7 1012 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 CLCA2Q9UQC9 943 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 ALG6Q9Y672 507 aa11.77□□□□□ -0.53
SMIM11A-201ENST00000399292 CPED1A4D0V7 1026 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 EME2A4GXA9 379 aaPredicted RBP11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 NPIPB15A6NHN6 443 aaPredicted RBP11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 KCNK1O00180 336 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 PSMD11O00231 422 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 TAF4O00268 1085 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 TNFRSF10CO14798 259 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 HLA-DQB2P05538 268 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 ETV3P41162 512 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 KIAA1024LP59773 190 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 CYP4F3Q08477 520 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 NIPAL4Q0D2K0 466 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 AP1B1Q10567 949 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 PTPRRQ15256 657 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 NR0B2Q15466 257 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 CDKN3Q16667 212 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 LVRNQ6Q4G3 990 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 BZW1Q7L1Q6 419 aaKnown RBP11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 HSD11B1LQ7Z5J1 315 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 PROSER1Q86XN7 944 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 GKN2Q86XP6 184 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 TMTC1Q8IUR5 882 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 ALDH16A1Q8IZ83 802 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 OR56A4Q8NGH8 313 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 ARRDC2Q8TBH0 407 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 IFI44Q8TCB0 444 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 NUS1Q96E22 293 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 BOCQ9BWV1 1114 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 BRD8Q9H0E9 1235 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 WDR26Q9H7D7 661 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 PCDH9Q9HC56 1237 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 CHKBQ9Y259 395 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 EPN1Q9Y6I3 576 aaPredicted RBP11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 DGKBQ9Y6T7 804 aa11.76□□□□□ -0.53
SMIM11A-201ENST00000399292 CELSR3Q9NYQ7 3312 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 A0A0A6YYK5 440 aaPredicted RBP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 LY6G6EA0A0G2JKS1 128 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 A0A0J9YYE9 177 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 TMEM202A6NGA9 273 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 PPP1R12AO14974 1030 aaPredicted RBP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 PSTPIP1O43586 416 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 OPA1O60313 960 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 ZRANB2O95218 330 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 IPO7O95373 1038 aaKnown RBP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 MT-CO3P00414 261 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 TRBC1P01850 177 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 LHCGRP22888 699 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 NR2C2P49116 596 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 RPL26P61254 145 aaKnown RBP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 DYNLT1P63172 113 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 IFI35P80217 286 aaPredicted RBP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 TFDP2Q14188 446 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 IHHQ14623 411 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 CRTC1Q6UUV9 634 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 MFSD7Q6UXD7 560 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 NPNTQ6UXI9 565 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 Q6ZVL8 140 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 EFL1Q7Z2Z2 1120 aaKnown RBP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 TSPAN33Q86UF1 283 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 GAS2L3Q86XJ1 694 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 RCOR2Q8IZ40 523 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 CNTD1Q8N815 330 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 DCBLD1Q8N8Z6 715 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 MAPK15Q8TD08 544 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 OR1E3Q8WZA6 343 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 DTD2Q96FN9 168 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 CALR3Q96L12 384 aaKnown RBP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 RBM15Q96T37 977 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 LGR4Q9BXB1 951 aa11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 TDRD1Q9BXT4 1180 aaKnown RBP11.75□□□□□ -0.53
SMIM11A-201ENST00000399292 PHPT1Q9NRX4 125 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms