RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TDRD1Q9BXT4 1180 aaKnown RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 YTHDF1Q9BYJ9 559 aaKnown RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 SEPT3Q9UH03 358 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 NRCAMQ92823 1304 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 PCNTO95613 3336 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 SMIM28A0A1B0GU29 152 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 CACNG3O60359 315 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 HLA-DQB2P05538 268 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 CLCN5P51795 746 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 PLA2G16P53816 162 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 RAD23AP54725 363 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 ARHGAP1Q07960 439 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 KIAA0319Q5VV43 1072 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 ARMCX2Q7L311 632 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 ISCA2Q86U28 154 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 PHYKPLQ8IUZ5 450 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 BIRC7Q96CA5 298 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 ITPKCQ96DU7 683 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 L3HYPDHQ96EM0 354 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 TEX37Q96LM6 180 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 ALPK1Q96QP1 1244 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 CHID1Q9BWS9 393 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 DGCR6LQ9BY27 220 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 TUBB1Q9H4B7 451 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 LTB4R2Q9NPC1 389 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 C8orf4Q9NR00 106 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 GDAP2Q9NXN4 497 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 SLAMF8Q9P0V8 285 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 FAM32AQ9Y421 112 aaKnown RBP13.95□□□□□ -0.18
APOB-202ENST00000399256 CPQQ9Y646 472 aa13.95□□□□□ -0.18
APOB-202ENST00000399256 GSTT2P0CG29 244 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 GSTT2BP0CG30 244 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 ADRA1AP35348 466 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 GEMP55040 296 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 RPS3AP61247 264 aaKnown RBP13.94□□□□□ -0.18
APOB-202ENST00000399256 HERVK_113P63132 956 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 AQP6Q13520 282 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 IMPG1Q17R60 797 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 FBXO48Q5FWF7 155 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 PAGE3Q5JUK9 113 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 R3HCC1LQ7Z5L2 792 aaKnown RBP13.94□□□□□ -0.18
APOB-202ENST00000399256 NRBF2Q96F24 287 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 TSPAN17Q96FV3 270 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 MRGPRX2Q96LB1 330 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 TSGA13Q96PP4 275 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 ERVK-6Q9BXR3 956 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 MRM3Q9HC36 420 aaKnown RBP13.94□□□□□ -0.18
APOB-202ENST00000399256 SACM1LQ9NTJ5 587 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 POLG2Q9UHN1 485 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 B3GNT3Q9Y2A9 372 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 VWA7Q9Y334 891 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 OAS3Q9Y6K5 1087 aaKnown RBP13.94□□□□□ -0.18
APOB-202ENST00000399256 KPNA4O00629 521 aaPredicted RBP13.94□□□□□ -0.18
APOB-202ENST00000399256 AZIN1O14977 448 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 CNOT3O75175 753 aaKnown RBP13.94□□□□□ -0.18
APOB-202ENST00000399256 CCNA1P78396 465 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 ECT2LQ008S8 904 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 MTA1Q13330 715 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 WSCD1Q658N2 575 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 BLOC1S3Q6QNY0 202 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 DCP1BQ8IZD4 617 aaKnown RBP13.94□□□□□ -0.18
APOB-202ENST00000399256 PDPRQ8NCN5 879 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 ELP3Q9H9T3 547 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 GPN2Q9H9Y4 310 aaPredicted RBP13.94□□□□□ -0.18
APOB-202ENST00000399256 CRYL1Q9Y2S2 319 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 TSC22D4Q9Y3Q8 395 aa13.94□□□□□ -0.18
APOB-202ENST00000399256 ASPDHA6ND91 283 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 OR51F1A6NGY5 319 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 TOR1BO14657 336 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 ABCB7O75027 752 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 XYLBO75191 536 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 PCNAP12004 261 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 JUNBP17275 347 aaPredicted RBP13.93□□□□□ -0.18
APOB-202ENST00000399256 LBPP18428 481 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 ALKAL1Q6UXT8 129 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 OSCP1Q8WVF1 389 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 TXNRD2Q9NNW7 524 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 SDR39U1Q9NRG7 319 aaPredicted RBP13.93□□□□□ -0.18
APOB-202ENST00000399256 TMEM30AQ9NV96 361 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 ATAD3AQ9NVI7 634 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 RBM22Q9NW64 420 aaKnown RBP eCLIP13.93□□□□□ -0.183e-24■■■■□ 26.2
APOB-202ENST00000399256 GIN1Q9NXP7 522 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 CACNG4Q9UBN1 327 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 A0A1B0GTL3 188 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 UBXN8O00124 270 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 CNMDO75829 334 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 CD4P01730 458 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 MYL3P08590 195 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 TCF3P15923 654 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 HRH2P25021 359 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 LEPRP48357 1165 aaKnown RBP13.93□□□□□ -0.18
APOB-202ENST00000399256 KCTD2Q14681 263 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 POLD3Q15054 466 aaPredicted RBP13.93□□□□□ -0.18
APOB-202ENST00000399256 PFKFB4Q16877 469 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 ZNF362Q5T0B9 420 aaPredicted RBP13.93□□□□□ -0.18
APOB-202ENST00000399256 GTF2IRD2BQ6EKJ0 949 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 KIAA0408Q6ZU52 694 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 GTF2IRD2Q86UP8 949 aa13.93□□□□□ -0.18
APOB-202ENST00000399256 KLHDC8BQ8IXV7 354 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms