RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 ATOH8Q96SQ7 321 aa6.81□□□□□ -1.32
CX3CR1-202ENST00000399220 SMG9Q9H0W8 520 aaKnown RBP6.81□□□□□ -1.32
CX3CR1-202ENST00000399220 LINC00597Q9H2U6 94 aa6.81□□□□□ -1.32
CX3CR1-202ENST00000399220 ZNF385DQ9H6B1 395 aa6.81□□□□□ -1.32
CX3CR1-202ENST00000399220 ZFYVE1Q9HBF4 777 aa6.81□□□□□ -1.32
CX3CR1-202ENST00000399220 ST14Q9Y5Y6 855 aa6.81□□□□□ -1.32
CX3CR1-202ENST00000399220 CAPN7Q9Y6W3 813 aa6.81□□□□□ -1.32
CX3CR1-202ENST00000399220 DOCK8Q8NF50 2099 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 NEDD8-MDP1E9PL57 170 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 DLX3O60479 287 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PKMP14618 531 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 IMPDH1P20839 514 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 ACRV1P26436 265 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PRDX6P30041 224 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 MC4RP32245 332 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 SPAM1P38567 509 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PBX2P40425 430 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 NRIP1P48552 1158 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 CCNHP51946 323 aaPredicted RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 INHBCP55103 352 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 TMPRSS15P98073 1019 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 IFT88Q13099 833 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 FBXW10Q5XX13 1052 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 KLC3Q6P597 504 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 CRTC1Q6UUV9 634 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 EPGNQ6UW88 154 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 USP45Q70EL2 814 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 TBC1D1Q86TI0 1168 aaPredicted RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 KLHDC8AQ8IYD2 350 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 LSMEM2Q8N112 164 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 RFWD2Q8NHY2 731 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 KCTD4Q8WVF5 259 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 FGF13Q92913 245 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 NXNL1Q96CM4 212 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 RMDN1Q96DB5 314 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 FAR2Q96K12 515 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 TSNARE1Q96NA8 513 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 HEPHQ9BQS7 1158 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 CCDC28BQ9BUN5 200 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 MECRQ9BV79 373 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 WWP1Q9H0M0 922 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 HPS4Q9NQG7 708 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 THG1LQ9NWX6 298 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 EVLQ9UI08 416 aaPredicted RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 RUVBL2Q9Y230 463 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 APOBEC2Q9Y235 224 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 DHRS7Q9Y394 339 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PKP3Q9Y446 797 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 GOLGA8CPA6NN73 597 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 ANHXE9PGG2 379 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 STX7O15400 261 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 KERAO60938 352 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 SRP72O76094 671 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 TOP3BO95985 862 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 SERPINA6P08185 405 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 FGF4P08620 206 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 GSTM1P09488 218 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 ATXN8OSP0DMR3 200 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 CYP2A6P11509 494 aaPredicted RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 SP100P23497 879 aaPredicted RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 VIPR1P32241 457 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 SLC8A1P32418 973 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 GCKP35557 465 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 DGKGP49619 791 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 ELF3P78545 371 aaPredicted RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 GSTM4Q03013 218 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PRKAA1Q13131 559 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 NFATC2Q13469 925 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PPP2R2DQ66LE6 453 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 C16orf46Q6P387 395 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 NEK10Q6ZWH5 1172 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PTAR1Q7Z6K3 402 aaPredicted RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 CAMK1DQ8IU85 385 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PARP9Q8IXQ6 854 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 CPSF7Q8N684 471 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PTCD3Q96EY7 689 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 ASIC4Q96FT7 647 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 MSLNLQ96KJ4 702 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PAIP2Q9BPZ3 127 aaKnown RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 GATA5Q9BWX5 397 aaPredicted RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 FAM126AQ9BYI3 521 aaPredicted RBP6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 EPHX3Q9H6B9 360 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 ARHGEF3Q9NR81 526 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 ABCF3Q9NUQ8 709 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 TAS2R13Q9NYV9 303 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 FKBPLQ9UIM3 349 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 PCDHB9Q9Y5E1 797 aa6.8□□□□□ -1.32
CX3CR1-202ENST00000399220 A0A1W2PPC1 479 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 C10orf142B7Z368 130 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 MATN2O00339 956 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 IPO13O94829 963 aaKnown RBP6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 AP2A2O94973 939 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 UNC5CO95185 931 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 PYGLP06737 847 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 BPIP17213 487 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 AOC1P19801 751 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 TEAD1P28347 426 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 CA8P35219 290 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 ARFIP2P53365 341 aa6.79□□□□□ -1.32
CX3CR1-202ENST00000399220 SLC12A2P55011 1212 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms