RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PLEKHG4BQ96PX9 1271 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 C19orf43Q9BQ61 176 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 APOOQ9BUR5 198 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TEX101Q9BY14 249 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 IL22Q9GZX6 179 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PLAC1Q9HBJ0 212 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 XAB2Q9HCS7 855 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CHRAC1Q9NRG0 131 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TREX1Q9NSU2 369 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 NLE1Q9NVX2 485 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 WHRNQ9P202 907 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SUSD2Q9UGT4 822 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GMEB2Q9UKD1 530 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RIMKLBQ9ULI2 386 aa12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ZFHX2Q9C0A1 2572 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB1-203ENST00000399082 HEATR9A2RTY3 570 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 C2orf81A6NN90 581 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PRR5-ARHGAP8B1AHC4 643 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 H7C0S8 307 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 STX7O15400 261 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PRSS56P0CW18 603 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GNSP15586 552 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TSHRP16473 764 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ARNTP27540 789 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 NMBRP28336 390 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SPAM1P38567 509 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DPP6P42658 865 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CTSKP43235 329 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DRG2P55039 364 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 IRX4P78413 519 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GUCY2DQ02846 1103 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DHX9Q08211 1270 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SPEM2Q0P670 501 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 GRIK2Q13002 908 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FZD2Q14332 565 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CHRNA6Q15825 494 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 KIF19Q2TAC6 998 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ATP13A5Q4VNC0 1218 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PCID2Q5JVF3 399 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RAET1GQ6H3X3 334 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CES3Q6UWW8 571 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FAM151BQ6UXP7 276 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ADAMTSL4Q6UY14 1074 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TRIM74Q86UV6 250 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 IGDCC3Q8IVU1 814 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 TRAM1L1Q8N609 369 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 OR2I1PQ8NGU4 316 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CEP76Q8TAP6 659 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 DTX3LQ8TDB6 740 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 STYXQ8WUJ0 223 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ART4Q93070 314 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CCDC97Q96F63 343 aaPredicted RBP12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 COX14Q96I36 57 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 KIFC1Q9BW19 673 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RAB17Q9H0T7 212 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 CDH19Q9H159 772 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 RXFP3Q9NSD7 469 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SEMA4GQ9NTN9 838 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ZDHHC18Q9NUE0 388 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 KCTD5Q9NXV2 234 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 BFARQ9NZS9 450 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ANAPC5Q9UJX4 755 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ANKRD6Q9Y2G4 727 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 FNDC3AQ9Y2H6 1198 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 PKP3Q9Y446 797 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 SNX11Q9Y5W9 270 aa12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 OAS3Q9Y6K5 1087 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB1-203ENST00000399082 EP300Q09472 2414 aaPredicted RBP12.33□□□□□ -0.43
HLA-DQB1-203ENST00000399082 ZNF292O60281 2723 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GLYATL1P3A0A0U1RQE8 302 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 LNP1A1A4G5 178 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TMEM202A6NGA9 273 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 OR51F1A6NGY5 319 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 AGAP14A8MT82 685 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 AP3B1O00203 1094 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TLR4O00206 839 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TOR1BO14657 336 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UGT1A9O60656 530 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 LRP3O75074 770 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PPFIA2O75334 1257 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FUCA1P04066 466 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CFIP05156 583 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZNF806P0C7X5 589 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UGT1A6P19224 532 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UGT1A1P22309 533 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UGT1A4P22310 534 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ECHS1P30084 290 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UGT1A3P35503 534 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UGT1A5P35504 534 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GPR1P46091 355 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RABIFP47224 123 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 KIAA1024LP59773 190 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SARNPP82979 210 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CDK3Q00526 305 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 OVGP1Q12889 678 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 EIF2B5Q13144 721 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 NFATC4Q14934 902 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms