RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ELK4P28324 431 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 AXLP30530 894 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DIO3P55073 304 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 TSNQ15631 228 aaKnown RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 FAM187BQ17R55 369 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PACRGLQ8N7B6 248 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PTCD2Q8WV60 388 aaKnown RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 FBXO32Q969P5 355 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SERPINB11Q96P15 392 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 POLR1EQ9GZS1 481 aaKnown RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MUC3BQ9H195 1237 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 BPIFA1Q9NP55 256 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 USE1Q9NZ43 259 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PTBP2Q9UKA9 531 aaKnown RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 VPS9D1Q9Y2B5 631 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 TBC1D30Q9Y2I9 924 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 LOC100506127A0A0U1RQW1 187 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 K7EPI3 171 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PLOD2O00469 737 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 IL7RP16871 459 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CD68P34810 354 aaPredicted RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 OR1G1P47890 313 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 INPP1P49441 399 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SEPHS1P49903 392 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GALNT2Q10471 571 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 LCP2Q13094 533 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PMS2P3Q13401 168 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RSBN1Q5VWQ0 802 aaPredicted RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PAGE2Q7Z2X7 111 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SLC15A3Q8IY34 581 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 TMEM86AQ8N2M4 240 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF540Q8NDQ6 660 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 OR4L1Q8NH43 312 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RAB2BQ8WUD1 216 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF597Q96LX8 424 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CCM2LQ9NUG4 571 aaPredicted RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 EXD2Q9NVH0 621 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MAGEL2Q9UJ55 1249 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CDH9Q9ULB4 789 aa11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 POLR3HQ9Y535 204 aaPredicted RBP11.08□□□□□ -0.64
CSGALNACT1-202ENST00000397998 NPEPPSL1A6NEC2 478 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 LRRC14BA6NHZ5 514 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GSNP06396 782 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CD1EP15812 388 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DPP6P42658 865 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 EPS8Q12929 822 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ARHGEF7Q14155 803 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PDCD4Q53EL6 469 aaKnown RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PROSER1Q86XN7 944 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CHERPQ8IWX8 916 aaKnown RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 LEMD2Q8NC56 503 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SCAMP5Q8TAC9 235 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ASIC4Q96FT7 647 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MUS81Q96NY9 551 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 BBS2Q9BXC9 721 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PDGFDQ9GZP0 370 aaPredicted RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 REXO4Q9GZR2 422 aaKnown RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ACTR8Q9H981 624 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PDE10AQ9Y233 779 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RNF11Q9Y3C5 154 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CBX4O00257 560 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CXCL11O14625 94 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ASNA1O43681 348 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DDNO94850 711 aaPredicted RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 OR4F21O95013 312 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 BMP10O95393 424 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MLYCDO95822 493 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PRKCGP05129 697 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DBTP11182 482 aaKnown RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF26P17031 533 aaPredicted RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 HOXB8P17481 243 aaPredicted RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 HERVK_113P63132 956 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 TXNL4AP83876 142 aaKnown RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 BEX3Q00994 111 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GRB7Q14451 532 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 MFSD10Q14728 455 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 TMEM102Q8N9M5 508 aaPredicted RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CLHC1Q8NHS4 586 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PPTC7Q8NI37 304 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 DACT3Q96B18 629 aaPredicted RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CDCA5Q96FF9 252 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 NODALQ96S42 347 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ERVK-6Q9BXR3 956 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ABCG8Q9H221 673 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CNOT11Q9UKZ1 510 aaKnown RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 KCTD3Q9Y597 815 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 ZNF195O14628 629 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 CPSF4O95639 269 aaKnown RBP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 TRAF3Q13114 568 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 TGFBIQ15582 683 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GNASQ5JWF2 1037 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GPR180Q86V85 440 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 SETD9Q8NE22 299 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 GPR21Q99679 349 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 RERGLQ9H628 205 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 PLAC1Q9HBJ0 212 aa11.07□□□□□ -0.64
CSGALNACT1-202ENST00000397998 FAIMQ9NVQ4 179 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms