RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 DLGAP1O14490 977 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 ANXA9O76027 345 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 TGM1P22735 817 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 POLD2P49005 469 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 IFITM2Q01629 132 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 POU4F1Q01851 419 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 ABHD11Q8NFV4 315 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 OR7G1Q8NGA0 311 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 PGAP3Q96FM1 320 aaPredicted RBP15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 LRCH3Q96II8 777 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 FCRL5Q96RD9 977 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 SLC25A23Q9BV35 468 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 CD320Q9NPF0 282 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 AURKCQ9UQB9 309 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 UBFD1O14562 309 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 GABRDO14764 452 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 CACNG3O60359 315 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 TPST1O60507 370 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 SMIM10L2AP0DMW4 78 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 SMIM10L2BP0DMW5 78 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 PAMP19021 973 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 EEF1DP29692 281 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 TUBA3CQ13748 450 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 BHLHA9Q7RTU4 235 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 SENP8Q96LD8 212 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 TSGA13Q96PP4 275 aa15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 TMA7Q9Y2S6 64 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 MTF2Q9Y483 593 aaPredicted RBP15.94■□□□□ 0.14
CHMP1A-201ENST00000397901 FAM149AA5PLN7 773 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 C9JVG2 144 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 PSMD11O00231 422 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 PTGESO14684 152 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 F9P00740 461 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 HLA-DQB2P05538 268 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 MAPK10P53779 464 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 SNX17Q15036 470 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 PSMD5Q16401 504 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 XKR4Q5GH76 650 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 AGAP9Q5VTM2 703 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 PM20D1Q6GTS8 502 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 ERMP1Q7Z2K6 904 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 LDB1Q86U70 411 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 ARHGAP12Q8IWW6 846 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 ELMOD1Q8N336 334 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 CBR4Q8N4T8 237 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 SMG8Q8ND04 991 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 ANKRD49Q8WVL7 239 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 EXT2Q93063 718 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 SH3GL1Q99961 368 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 UPF3AQ9H1J1 476 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 TREX1Q9NSU2 369 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 HACD3Q9P035 362 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 GIMAP2Q9UG22 337 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 TANC1Q9C0D5 1861 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 PARNO95453 639 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 F2P00734 622 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 LTA4HP09960 611 aaKnown RBP15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 CHRNB1P11230 501 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 JUNBP17275 347 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 TTC23LQ6PF05 361 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 BTLAQ7Z6A9 289 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 RETREG3Q86VR2 466 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 OR2T34Q8NGX1 318 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 OR2T3Q8NH03 318 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 CAPSLQ8WWF8 208 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 SEPT8Q92599 483 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 C3orf30Q96M34 536 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 GLT1D1Q96MS3 346 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 NDFIP2Q9NV92 336 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 ARMC1Q9NVT9 282 aa15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 RBM22Q9NW64 420 aaKnown RBP eCLIP15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-201ENST00000397901 MBLAC1A4D2B0 266 aaPredicted RBP15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 MEIS3P2A8K0S8 358 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 CENPBD1B2RD01 187 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 NR5A2O00482 541 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 CCL22O00626 93 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 CLOCKO15516 846 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 SEC14L2O76054 403 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 SUPT7LO94864 414 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 CCNCP24863 283 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 ADRA1AP35348 466 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 TRPC1P48995 793 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 HLCSP50747 726 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 GEMP55040 296 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 KIF19Q2TAC6 998 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 RAB41Q5JT25 222 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 PRAMEF19Q5SWL8 479 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 KIAA0930Q6ICG6 404 aaPredicted RBP15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 FAM45BPQ6NSW5 357 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 CYHR1Q6ZMK1 362 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 FUNDC1Q8IVP5 155 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 FAM45AQ8TCE6 357 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 NRBF2Q96F24 287 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 MRGPRX2Q96LB1 330 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 SLC39A8Q9C0K1 460 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 HOXD1Q9GZZ0 328 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 GSTO2Q9H4Y5 243 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 ALG9Q9H6U8 611 aa15.92■□□□□ 0.14
CHMP1A-201ENST00000397901 PKD2L2Q9NZM6 624 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms