RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 MAPK1P28482 360 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 CLNS1AP54105 237 aaKnown RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 CAPRIN2Q6IMN6 1127 aaKnown RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 GALNT18Q6P9A2 607 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 NCEH1Q6PIU2 408 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 ISCA2Q86U28 154 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 TMEM120AQ9BXJ8 343 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 NT5MQ9NPB1 228 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 ADGRE2Q9UHX3 823 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 ARID1BQ8NFD5 2236 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 ENO4A6NNW6 628 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 CXorf49A8MYA2 514 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 COCHO43405 550 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 DLX3O60479 287 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 OTCP00480 354 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 PRLP01236 227 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 PRR35P0CG20 571 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 AP2B1P63010 937 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 ARL13AQ5H913 290 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 KREMEN2Q8NCW0 462 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 TNIP2Q8NFZ5 429 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 FAM174AQ8TBP5 190 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 FKBP10Q96AY3 582 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 MTERF3Q96E29 417 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 NECTIN4Q96NY8 510 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 VPS35Q96QK1 796 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 SPATA9Q9BWV2 254 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 BRINP2Q9C0B6 783 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 SMIM23A6NLE4 172 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 TEX28O15482 410 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 KRT6AP02538 564 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 KRT6BP04259 564 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 MPC1LP0DKB6 136 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 KRT6CP48668 564 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 DPTQ07507 201 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 TUBB3Q13509 450 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 TMEM184AQ6ZMB5 413 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 LGI2Q8N0V4 545 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 DDHD1Q8NEL9 900 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 ADCY4Q8NFM4 1077 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 NTMT1Q9BV86 223 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 DNAJC17Q9NVM6 304 aaKnown RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 SH3BP1Q9Y3L3 701 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 VNN2O95498 520 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 ADH1CP00326 375 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 GPIP06744 558 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 LBPP18428 481 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 SERPINB3P29508 390 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 SLC1A2P43004 574 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 RHOAP61586 193 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 ELOAQ14241 798 aaKnown RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 GBX1Q14549 363 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 QPCTQ16769 361 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 AGR3Q8TD06 166 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 RMDN2Q96LZ7 410 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 CPSF2Q9P2I0 782 aaKnown RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 DNAJC16Q9Y2G8 782 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 C15orf41Q9Y2V0 281 aa5.84□□□□□ -1.47
PTPRD-206ENST00000397617 TIMM13Q9Y5L4 95 aaPredicted RBP5.84□□□□□ -1.47
PTPRD-206ENST00000397617 VHLP40337 213 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 BCL2L1Q07817 233 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 BIRC2Q13490 618 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 LRRC70Q7Z2Q7 622 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 ASB9Q96DX5 294 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 OMDQ99983 421 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 FAM192AQ9GZU8 254 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 CXCL16Q9H2A7 254 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 RMI1Q9H9A7 625 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 CD320Q9NPF0 282 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 TRMT6Q9UJA5 497 aaKnown RBP5.84□□□□□ -1.48
PTPRD-206ENST00000397617 PSMD13Q9UNM6 376 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 NOTCH4Q99466 2003 aa5.84□□□□□ -1.48
PTPRD-206ENST00000397617 KCNA5P22460 613 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 PIK3CBP42338 1070 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 RXRGP48443 463 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 MNX1P50219 401 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 SULT1C3Q6IMI6 304 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 IRGCQ6NXR0 463 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 NEK5Q6P3R8 708 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ZFPM2Q8WW38 1151 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 PIH1D2Q8WWB5 315 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ACSF2Q96CM8 615 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 UHRF1Q96T88 793 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 SEPT5Q99719 369 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 MRPL1Q9BYD6 325 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ZBTB26Q9HCK0 441 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 CDYLQ9Y232 598 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 RAD51BO15315 384 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 VEGFDO43915 354 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 DNAJB5O75953 348 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 C8AP07357 584 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 UROSP10746 265 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 HRH2P25021 359 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 GABRB3P28472 473 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 HNRNPH1P31943 449 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 RCAN2Q14206 197 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 XKR7Q5GH72 579 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 CELF5Q8N6W0 485 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 HDAC10Q969S8 669 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ZUFSPQ96AP4 578 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms