RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 DUSP23Q9BVJ7 150 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 MRPL40Q9NQ50 206 aaKnown RBP25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 RAB6BQ9NRW1 208 aa25.23■■□□□ 1.63
TSPAN4-207ENST00000397411 GOLGA6L10A0A0M3HER8 536 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 CTAGE9A4FU28 777 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 CES2O00748 559 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 TNFSF14O43557 240 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 BUD23O43709 281 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 CRTAMO95727 393 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 GAS8O95995 478 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 BPIP17213 487 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 TCEA2Q15560 299 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 HENMT1Q5T8I9 393 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 N4BP2L1Q5TBK1 243 aaPredicted RBP25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 ZDHHC20Q5W0Z9 365 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 PPP1R21Q6ZMI0 780 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 TTC30BQ8N4P2 665 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 OR4C6Q8NH72 309 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 ACTRT1Q8TDG2 376 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 TBATAQ96M53 351 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 WDR24Q96S15 920 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 ZSCAN5AQ9BUG6 496 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 FGF22Q9HCT0 170 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 NLGN3Q9NZ94 848 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 PNMA8BQ9ULN7 279 aaPredicted RBP25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 APOBEC2Q9Y235 224 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 TMEM98Q9Y2Y6 226 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 DGKBQ9Y6T7 804 aa25.22■■□□□ 1.63
TSPAN4-207ENST00000397411 PRSS38A1L453 326 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 ERI2A8K979 691 aaKnown RBP25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 TRIM38O00635 465 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 ZNF185O15231 689 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 SIGLEC6O43699 453 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 AP2A1O95782 977 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 SOD1P00441 154 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 ZSCAN5DPP0CG00 497 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 LPOP22079 712 aaPredicted RBP25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 RPL22P35268 128 aaKnown RBP25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 DCDC1P59894 354 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 DAB2P98082 770 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 TAF1AQ15573 450 aaPredicted RBP25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 DEFB133Q30KQ1 61 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 KCTD11Q693B1 232 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 TRIM74Q86UV6 250 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 GKN2Q86XP6 184 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 TRAM1L1Q8N609 369 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 DNAAF3Q8N9W5 541 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 BRSK1Q8TDC3 778 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 PDXPQ96GD0 296 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 LRRC61Q9BV99 259 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 CARS2Q9HA77 564 aaKnown RBP25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 SMARCAL1Q9NZC9 954 aa25.21■■□□□ 1.63
TSPAN4-207ENST00000397411 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.21■■□□□ 1.631e-6■■■■□ 22.7
TSPAN4-207ENST00000397411 CEACAM5P06731 702 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 GNPDA1P46926 289 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 POLD2P49005 469 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 PDE1BQ01064 536 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 NYAP1Q6ZVC0 841 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 KLHDC8BQ8IXV7 354 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 BAHD1Q8TBE0 780 aaPredicted RBP25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 FRMD8Q9BZ67 464 aaPredicted RBP25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 ARNT2Q9HBZ2 717 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 EVA1BQ9NVM1 165 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 IL17CQ9P0M4 197 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 GPSM3Q9Y4H4 160 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 ARL5AQ9Y689 179 aa25.2■■□□□ 1.62
TSPAN4-207ENST00000397411 FADS2P1A8MWK0 482 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 PPFIA2O75334 1257 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 SLC25A14O95258 325 aaPredicted RBP25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 TPH1P17752 444 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 SPAM1P38567 509 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 DENND5AQ6IQ26 1287 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 MARK2Q7KZI7 788 aaKnown RBP25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 TAF8Q7Z7C8 310 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 GLRX5Q86SX6 157 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 C17orf53Q8N3J3 647 aaPredicted RBP25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 GLIS1Q8NBF1 620 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 GLMNQ92990 594 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 PLEKHG4BQ96PX9 1271 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 SAR1BQ9Y6B6 198 aa25.19■■□□□ 1.62
TSPAN4-207ENST00000397411 LMO7DNF2Z398 122 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 TPP1O14773 563 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 YY2O15391 372 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 APRTP07741 180 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 BASP1P80723 227 aaKnown RBP25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 SEPT6Q14141 434 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 PDPK2PQ6A1A2 396 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 SDR16C5Q8N3Y7 309 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 OR4K2Q8NGD2 314 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 GDAP1Q8TB36 358 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 COX14Q96I36 57 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 CAPZA3Q96KX2 299 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 CLPBQ9H078 707 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 NFKBIL1Q9UBC1 381 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 CNOT6Q9ULM6 557 aaKnown RBP25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 SUFUQ9UMX1 484 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 SLC17A4Q9Y2C5 497 aa25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 ARID1BQ8NFD5 2236 aaPredicted RBP25.18■■□□□ 1.62
TSPAN4-207ENST00000397411 GLYATL1P3A0A0U1RQE8 302 aa25.17■■□□□ 1.62
TSPAN4-207ENST00000397411 IVLP07476 585 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms