RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TPH1P17752 444 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 HADHAP40939 763 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 RPL26P61254 145 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 POLR2LP62875 67 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 GAS6Q14393 721 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 SETDB1Q15047 1291 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 HSP90AA5PQ58FG0 334 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 SIRPB2Q5JXA9 342 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 CACUL1Q86Y37 369 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 NUDCD3Q8IVD9 361 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 PPHLN1Q8NEY8 458 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 HCAR2Q8TDS4 363 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 ECHDC3Q96DC8 303 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 LRRC37BQ96QE4 947 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 AGAP2Q99490 1192 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 GPR22Q99680 433 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 CD248Q9HCU0 757 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 TREX1Q9NSU2 369 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 C20orf96Q9NUD7 363 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 POLR3BQ9NW08 1133 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 DKK3Q9UBP4 350 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 RPL26L1Q9UNX3 145 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 VCANP13611 3396 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 BPTFQ12830 3046 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 TSPAN11A1L157 253 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 TMEM221A6NGB7 291 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 C16orf96A6NNT2 1141 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 M0R296 226 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 ATP5HO75947 161 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 MPOP05164 745 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 XPAP23025 273 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 ITGB7P26010 798 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 SLC8A1P32418 973 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 CHRNA4P43681 627 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 GRIA4P48058 902 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 ARCN1P48444 511 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 DGKEP52429 567 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 RPS14P62263 151 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 PDE1BQ01064 536 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 PCLAFQ15004 111 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 CST6Q15828 149 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 N4BP2L1Q5TBK1 243 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 FBXW10Q5XX13 1052 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 FAM91A1Q658Y4 838 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 CWF19L1Q69YN2 538 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 KIAA0930Q6ICG6 404 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 TMPRSS6Q8IU80 811 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 SPEM1Q8N4L4 309 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 PIH1D2Q8WWB5 315 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 ARRDC3Q96B67 414 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 SKA1Q96BD8 255 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 ERP27Q96DN0 273 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 THOC1Q96FV9 657 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 ZNF778Q96MU6 729 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 IER2Q9BTL4 223 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 MKRN2Q9H000 416 aaKnown RBP14.88□□□□□ -0.03
CAPN3-207ENST00000397200 RHOJQ9H4E5 214 aa14.88□□□□□ -0.03
CAPN3-207ENST00000397200 TECTAO75443 2155 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 ANKRD66B4E2M5 251 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 MID1O15344 667 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 DNTTP04053 509 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 FGF3P11487 239 aaPredicted RBP14.87□□□□□ -0.03
CAPN3-207ENST00000397200 C5AR1P21730 350 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 ARNTP27540 789 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 TYK2P29597 1187 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 OVGP1Q12889 678 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 MSLNQ13421 630 aaPredicted RBP14.87□□□□□ -0.03
CAPN3-207ENST00000397200 CHI3L2Q15782 390 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 PARS2Q7L3T8 475 aaKnown RBP14.87□□□□□ -0.03
CAPN3-207ENST00000397200 LCA5Q86VQ0 697 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 ZSWIM9Q86XI8 627 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 OR6Y1Q8NGX8 325 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 SIPA1Q96FS4 1042 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 VPS39Q96JC1 886 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 IARS2Q9NSE4 1012 aaKnown RBP14.87□□□□□ -0.03
CAPN3-207ENST00000397200 TXLNGQ9NUQ3 528 aa14.87□□□□□ -0.03
CAPN3-207ENST00000397200 MTO1Q9Y2Z2 717 aaKnown RBP14.87□□□□□ -0.03
CAPN3-207ENST00000397200 BDP1A6H8Y1 2624 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 UPK3BL1B0FP48 263 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 UPK3BL2E5RIL1 263 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 NEFHP12036 1026 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 NFKBIAP25963 317 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 POLD2P49005 469 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 METAP1P53582 386 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 TMPRSS15P98073 1019 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 ZBTB16Q05516 673 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 UGP2Q16851 508 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 CCDC153Q494R4 210 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 FASTKD1Q53R41 847 aaKnown RBP14.86□□□□□ -0.03
CAPN3-207ENST00000397200 FBXL19Q6PCT2 694 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 KIAA1324Q6UXG2 1013 aaKnown RBP14.86□□□□□ -0.03
CAPN3-207ENST00000397200 ZC3HC1Q86WB0 502 aaKnown RBP14.86□□□□□ -0.03
CAPN3-207ENST00000397200 TSTD1Q8NFU3 115 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 HMGB4Q8WW32 186 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 SLC6A17Q9H1V8 727 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 SAR1AQ9NR31 198 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 KCNK4Q9NYG8 393 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 TMEM216Q9P0N5 145 aa14.86□□□□□ -0.03
CAPN3-207ENST00000397200 A0A0J9YYE9 177 aa14.85□□□□□ -0.03
CAPN3-207ENST00000397200 PAPSS2O95340 614 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms