RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LEFTY1O75610 366 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 EPHX1P07099 455 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 PIRTP0C851 137 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 MYZAPP0CAP1 466 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 SLC8A1P32418 973 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 IL12RB1P42701 662 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 POLR2LP62875 67 aaKnown RBP13.24□□□□□ -0.29
SEC13-209ENST00000397117 KRT71Q3SY84 523 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 HSP90B2PQ58FF3 399 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 GLT6D1Q7Z4J2 308 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 BAHD1Q8TBE0 780 aaPredicted RBP13.24□□□□□ -0.29
SEC13-209ENST00000397117 PIH1D2Q8WWB5 315 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 MFSD3Q96ES6 412 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 SRPK1Q96SB4 655 aaKnown RBP13.24□□□□□ -0.29
SEC13-209ENST00000397117 GPR174Q9BXC1 333 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 ROPN1BQ9BZX4 212 aaPredicted RBP13.24□□□□□ -0.29
SEC13-209ENST00000397117 MKRN2Q9H000 416 aaKnown RBP13.24□□□□□ -0.29
SEC13-209ENST00000397117 TMEM245Q9H330 911 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 CENPHQ9H3R5 247 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 ACSS3Q9H6R3 686 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 ROPN1Q9HAT0 212 aaPredicted RBP13.24□□□□□ -0.29
SEC13-209ENST00000397117 IL21RQ9HBE5 538 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 HACD3Q9P035 362 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 RABGEF1Q9UJ41 708 aa13.24□□□□□ -0.29
SEC13-209ENST00000397117 TLDC2A0PJX2 215 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 C2orf81A6NN90 581 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 METTL12A8MUP2 240 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 POC1B-GALNT4F8VUJ3 575 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 RASGRF2O14827 1237 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 SIN3BO75182 1162 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 DKK1O94907 266 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 IGLV3-19P01714 112 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 PRNPP04156 253 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 PRKCGP05129 697 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 CTPS1P17812 591 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 PRKCHP24723 683 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 NMBRP28336 390 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 ABL2P42684 1182 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 PDE1BQ01064 536 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 MSLNQ13421 630 aaPredicted RBP13.23□□□□□ -0.29
SEC13-209ENST00000397117 ELAVL3Q14576 367 aaKnown RBP13.23□□□□□ -0.29
SEC13-209ENST00000397117 LONRF1Q17RB8 773 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 C9orf64Q5T6V5 341 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 BRAT1Q6PJG6 821 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 CYS1Q717R9 158 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 TMPRSS7Q7RTY8 843 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 DSG4Q86SJ6 1040 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 CTAGE3PQ8IX95 158 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 STK40Q8N2I9 435 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 C1orf216Q8TAB5 229 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 MDM1Q8TC05 714 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 CDKL2Q92772 493 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 KLHL32Q96NJ5 620 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 FCRL3Q96P31 734 aaPredicted RBP13.23□□□□□ -0.29
SEC13-209ENST00000397117 TMEM109Q9BVC6 243 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 TRABDQ9H4I3 376 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 PPCSQ9HAB8 311 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 PLAC1Q9HBJ0 212 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 TOR4AQ9NXH8 423 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 OGFRQ9NZT2 677 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 DKK4Q9UBT3 224 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 PHTF1Q9UMS5 762 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 IKBKGQ9Y6K9 419 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 WASF2Q9Y6W5 498 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 FAM169AQ9Y6X4 670 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 TMEM131Q92545 1883 aa13.23□□□□□ -0.29
SEC13-209ENST00000397117 A0A0J9YYE9 177 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 MROH6A6NGR9 719 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 MEI4A8MW99 385 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 AGPSO00116 658 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 SYNCRIPO60506 623 aaKnown RBP13.22□□□□□ -0.29
SEC13-209ENST00000397117 TCEA3O75764 348 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 TRBC1P01850 177 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 NFKBIAP25963 317 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 SLCO1A2P46721 670 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 TPMTP51580 245 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 FRG1Q14331 258 aaKnown RBP13.22□□□□□ -0.29
SEC13-209ENST00000397117 STARD3Q14849 445 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 TAF1AQ15573 450 aaPredicted RBP13.22□□□□□ -0.29
SEC13-209ENST00000397117 SKIDA1Q1XH10 827 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 KBTBD12Q3ZCT8 623 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 TSTD2Q5T7W7 516 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 TRMT10BQ6PF06 316 aaKnown RBP13.22□□□□□ -0.29
SEC13-209ENST00000397117 USP45Q70EL2 814 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 EPS8L3Q8TE67 593 aaKnown RBP13.22□□□□□ -0.29
SEC13-209ENST00000397117 SETD7Q8WTS6 366 aaKnown RBP13.22□□□□□ -0.29
SEC13-209ENST00000397117 ECHDC3Q96DC8 303 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 MRRFQ96E11 262 aaKnown RBP13.22□□□□□ -0.29
SEC13-209ENST00000397117 CERS2Q96G23 380 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 PKNOX2Q96KN3 472 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 ZNF778Q96MU6 729 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 GAREM1Q9H706 876 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 MAGEE1Q9HCI5 957 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 C20orf96Q9NUD7 363 aaPredicted RBP13.22□□□□□ -0.29
SEC13-209ENST00000397117 MOCS1Q9NZB8 636 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 RAXQ9Y2V3 346 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 PCDHGB2Q9Y5G2 931 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 SPO11Q9Y5K1 396 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 ARL5AQ9Y689 179 aa13.22□□□□□ -0.29
SEC13-209ENST00000397117 ZCWPW2A0A1B0GU75 182 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms