RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 PTP4A2Q12974 167 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 NFATC2Q13469 925 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 DNASE1L3Q13609 305 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 WDR59Q6PJI9 974 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 DOK6Q6PKX4 331 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 Q6ZVL8 140 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 NLRP8Q86W28 1048 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 ZNF677Q86XU0 584 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 LZTR1Q8N653 840 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PAF1Q8N7H5 531 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 STAMBPL1Q96FJ0 436 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 TCTN2Q96GX1 697 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 CELF6Q96J87 481 aaKnown RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 C9orf72Q96LT7 481 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PHF12Q96QT6 1004 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 SLC25A23Q9BV35 468 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 STN1Q9H668 368 aaKnown RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 RCOR3Q9P2K3 495 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 KLHL3Q9UH77 587 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 ERRFI1Q9UJM3 462 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-202ENST00000396629 PHTF1Q9UMS5 762 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 FHOD1Q9Y613 1164 aa8.37□□□□□ -1.07
SCFD1-202ENST00000396629 A6NCN8 305 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SOCS5O75159 536 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 KIAA0754O94854 1291 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 NDUFA10O95299 355 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 KRT3P12035 628 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 VARSP26640 1264 aaKnown RBP8.36□□□□□ -1.07
SCFD1-202ENST00000396629 GPR1P46091 355 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 RENBPP51606 427 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 FOXM1Q08050 763 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 IL11RAQ14626 422 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 PRR30Q53SZ7 412 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-202ENST00000396629 KLHDC7AQ5VTJ3 777 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 DENND2CQ68D51 928 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SLC9B2Q86UD5 537 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 GALNT13Q8IUC8 556 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 PLXDC1Q8IUK5 500 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SRRM1Q8IYB3 904 aaKnown RBP8.36□□□□□ -1.07
SCFD1-202ENST00000396629 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 CT55Q8WUE5 264 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 COX14Q96I36 57 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 PSKH2Q96QS6 385 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SLC29A3Q9BZD2 475 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 ABCG8Q9H221 673 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 OGFRQ9NZT2 677 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 TBC1D29Q9UFV1 150 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 NOCTQ9UK39 431 aaKnown RBP8.36□□□□□ -1.07
SCFD1-202ENST00000396629 PADI1Q9ULC6 663 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 PPIL1Q9Y3C6 166 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 PCDHGB7Q9Y5F8 929 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 GOLGA6CA6NDK9 693 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 GOLGA6BA6NDN3 693 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 LILRA5A6NI73 299 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 C21orf140B9A014 251 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 TOX3O15405 576 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-202ENST00000396629 CCP110O43303 1012 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 DNAJC6O75061 913 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SPAG6O75602 509 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 CPP00450 1065 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 MT-ND3P03897 115 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 CCNYL3P0C7X3 344 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 GOLGA6DP0CG33 693 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 FGF5P12034 268 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 CHRNB2P17787 502 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 NFKBIAP25963 317 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 GARSP41250 739 aaKnown RBP8.36□□□□□ -1.07
SCFD1-202ENST00000396629 MAPK9P45984 424 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 MTIF2P46199 727 aaKnown RBP8.36□□□□□ -1.07
SCFD1-202ENST00000396629 GFERP55789 205 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 FMO1Q01740 532 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 IL10RBQ08334 325 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 MAN2A1Q16706 1144 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 UGT8Q16880 541 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SCYL2Q6P3W7 929 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 ARHGAP12Q8IWW6 846 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SLC34A3Q8N130 599 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 Q8NA96 180 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SLC30A5Q8TAD4 765 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SLC20A1Q8WUM9 679 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 THAP4Q8WY91 577 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SEC14L1Q92503 715 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 RNF31Q96EP0 1072 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 SCRN2Q96FV2 425 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 OR6C1Q96RD1 312 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 C11orf70Q9BRQ4 267 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 HERPUD2Q9BSE4 406 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 TBC1D10AQ9BXI6 508 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 ZNF768Q9H5H4 540 aaKnown RBP8.36□□□□□ -1.07
SCFD1-202ENST00000396629 UCK1Q9HA47 277 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 LHX9Q9NQ69 397 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 GOLGA6AQ9NYA3 693 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 ZNF451Q9Y4E5 1061 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 PCDHGC4Q9Y5F7 938 aa8.36□□□□□ -1.07
SCFD1-202ENST00000396629 PCYT1BQ9Y5K3 369 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-202ENST00000396629 KIR2DS5A0A0G2JLQ3 304 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 A0A0G2JNG1 304 aa8.35□□□□□ -1.07
SCFD1-202ENST00000396629 NPIPB15A6NHN6 443 aaPredicted RBP8.35□□□□□ -1.07
SCFD1-202ENST00000396629 SIGLEC16A6NMB1 481 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms