RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 BMP6P22004 513 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 NR1H2P55055 460 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 NME5P56597 212 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 GSTM4Q03013 218 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 MTM1Q13496 603 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 ARMC4Q5T2S8 1044 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 CAPN10Q9HC96 672 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 LIN7AO14910 233 aaPredicted RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 STK16O75716 305 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 ZNF30P17039 623 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 BRCC3P46736 316 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 PHF10Q8WUB8 498 aaKnown RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 PCDHB9Q9Y5E1 797 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 ISM1B1AKI9 464 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 LRCH4O75427 683 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 IFNA16P05015 189 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 LCP2Q13094 533 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 PRKD1Q15139 912 aaPredicted RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 VARS2Q5ST30 1063 aaKnown RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 KCTD4Q8WVF5 259 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 AP2M1Q96CW1 435 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 FBXL18Q96ME1 805 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 SEPHS2Q99611 448 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 CXorf56Q9H5V9 222 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 C11orf49Q9H6J7 331 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 PCDHGA4Q9Y5G9 962 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 ONECUT3O60422 494 aaPredicted RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 NUDT14O95848 222 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 CACNA2D1P54289 1103 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 DUSP4Q13115 394 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 SEMA5AQ13591 1074 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 LARS2Q15031 903 aaKnown RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 HGSNATQ68CP4 663 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 MED27Q6P2C8 311 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 CUZD1Q86UP6 607 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 ECHDC2Q86YB7 292 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 MRM3Q9HC36 420 aaKnown RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 ITM2CQ9NQX7 267 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 DUS2Q9NX74 493 aaKnown RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 ERGIC3Q9Y282 383 aa15.59■□□□□ 0.09
GNE-202ENST00000396594 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 PHRF1Q9P1Y6 1649 aaKnown RBP15.59■□□□□ 0.09
GNE-202ENST00000396594 PDE5AO76074 875 aa15.58■□□□□ 0.09
GNE-202ENST00000396594 RPL7AP62424 266 aaKnown RBP15.58■□□□□ 0.09
GNE-202ENST00000396594 RPL38P63173 70 aaKnown RBP15.58■□□□□ 0.09
GNE-202ENST00000396594 FSTL1Q12841 308 aa15.58■□□□□ 0.09
GNE-202ENST00000396594 GRSF1Q12849 480 aaKnown RBP eCLIP15.58■□□□□ 0.09
GNE-202ENST00000396594 CPXM1Q96SM3 734 aa15.58■□□□□ 0.09
GNE-202ENST00000396594 TFB2MQ9H5Q4 396 aaKnown RBP15.58■□□□□ 0.09
GNE-202ENST00000396594 INSL6Q9Y581 213 aa15.58■□□□□ 0.09
GNE-202ENST00000396594 KCPQ6ZWJ8 1503 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 FAM86C2PA6NEL3 165 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 GPIP06744 558 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 ATP6V1B1P15313 513 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 HERC3Q15034 1050 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 EIPR1Q53HC9 387 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 USP6NLQ92738 828 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 CLEC4MQ9H2X3 399 aaPredicted RBP15.58■□□□□ 0.08
GNE-202ENST00000396594 IL1RAPQ9NPH3 570 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 CCDC177Q9NQR7 707 aaPredicted RBP15.58■□□□□ 0.08
GNE-202ENST00000396594 TOPAZ1Q8N9V7 1692 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 PI15O43692 258 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 UBXN7O94888 489 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 VIPP01282 170 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 PROCP04070 461 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 RPIAP49247 311 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 CHN2P52757 468 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 SRSF11Q05519 484 aaKnown RBP15.58■□□□□ 0.08
GNE-202ENST00000396594 DHDDSQ86SQ9 333 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 KLHL23Q8NBE8 558 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 BHLHE22Q8NFJ8 381 aaPredicted RBP15.58■□□□□ 0.08
GNE-202ENST00000396594 LRTM1Q9HBL6 345 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 PALMDQ9NP74 551 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 HES2Q9Y543 173 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 SUOXP51687 545 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 GRB14Q14449 540 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 NDUFAF6Q330K2 333 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 CXXC5Q7LFL8 322 aaKnown RBP15.58■□□□□ 0.08
GNE-202ENST00000396594 SVOPLQ8N434 492 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 RAD51AP1Q96B01 352 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 PANX1Q96RD7 426 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 ARHGEF4Q9NR80 690 aa15.58■□□□□ 0.08
GNE-202ENST00000396594 PRORSD1PA6NEY8 169 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 TREHO43280 583 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 LATS1O95835 1130 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 TAL1P17542 331 aaPredicted RBP15.57■□□□□ 0.08
GNE-202ENST00000396594 FPGSQ05932 587 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
GNE-202ENST00000396594 BRAT1Q6PJG6 821 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.57■□□□□ 0.08
GNE-202ENST00000396594 CEP68Q76N32 757 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 MIPEPQ99797 713 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 NOCTQ9UK39 431 aaKnown RBP15.57■□□□□ 0.08
GNE-202ENST00000396594 CHD2O14647 1828 aaKnown RBP15.57■□□□□ 0.08
GNE-202ENST00000396594 NEDD8-MDP1E9PL57 170 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 INHAP05111 366 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 PIM1P11309 404 aaPredicted RBP15.57■□□□□ 0.08
GNE-202ENST00000396594 IGFBP4P22692 258 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 ABRQ12979 859 aa15.57■□□□□ 0.08
GNE-202ENST00000396594 OFCC1Q8IZS5 231 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms