RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 AARSD1Q9BTE6 412 aaKnown RBP13.94□□□□□ -0.18
COL4A3-202ENST00000396578 IKZF2Q9UKS7 526 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 KIAA1210Q9ULL0 1709 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 SCN2BO60939 215 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 RECQL4O94761 1208 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 EFR3AQ14156 821 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 OR2L3Q8NG85 312 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 COPS4Q9BT78 406 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 TAS2R14Q9NYV8 317 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 SIN3BO75182 1162 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 CTBP1Q13363 440 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 SEC23AQ15436 765 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 LDLRAP1Q5SW96 308 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 DUPD1Q68J44 220 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 QSOX2Q6ZRP7 698 aa13.94□□□□□ -0.18
COL4A3-202ENST00000396578 ZNF490Q9ULM2 529 aaPredicted RBP13.94□□□□□ -0.18
COL4A3-202ENST00000396578 PRMT3O60678 531 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 CES1P23141 567 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 MFSD10Q14728 455 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 RNF220Q5VTB9 566 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 SNRNP25Q9BV90 132 aaKnown RBP13.93□□□□□ -0.18
COL4A3-202ENST00000396578 SGK2Q9HBY8 427 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 MAN2B2Q9Y2E5 1009 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 PEX16Q9Y5Y5 336 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 MATN2O00339 956 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 CABYRO75952 493 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ZNF806P0C7X5 589 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ASMTP46597 345 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 GK5Q6ZS86 529 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 MAP4K3Q8IVH8 894 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 FAM71AQ8IYT1 594 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ARMC10Q8N2F6 343 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 CCDC54Q8NEL0 328 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 C17orf50Q8WW18 174 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 RASSF5Q8WWW0 418 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 EFHD2Q96C19 240 aaPredicted RBP13.93□□□□□ -0.18
COL4A3-202ENST00000396578 GJD4Q96KN9 370 aaPredicted RBP13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ABCG8Q9H221 673 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 PLEKHA1Q9HB21 404 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 CARNS1A5YM72 827 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 NDUFS2O75306 463 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 GPD2P43304 727 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ZNF234Q14588 700 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 CLP1Q92989 425 aaKnown RBP13.93□□□□□ -0.18
COL4A3-202ENST00000396578 SENP8Q96LD8 212 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 PNPOQ9NVS9 261 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 CAPN8A6NHC0 703 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 PLOD2O00469 737 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 GOT1P17174 413 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 SMU1Q2TAY7 513 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 RAP1GAP2Q684P5 730 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 FAAH2Q6GMR7 532 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 CUZD1Q86UP6 607 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 UNC93AQ86WB7 457 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 INO80EQ8NBZ0 244 aaPredicted RBP13.93□□□□□ -0.18
COL4A3-202ENST00000396578 CHST4Q8NCG5 386 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 AP2M1Q96CW1 435 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 SEMA3CQ99985 751 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 PDGFDQ9GZP0 370 aaPredicted RBP13.93□□□□□ -0.18
COL4A3-202ENST00000396578 GIN1Q9NXP7 522 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 PLLPQ9Y342 182 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 AIREO43918 545 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 TM7SF2O76062 418 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ITPKBP27987 946 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ADAM8P78325 824 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 EN1Q05925 392 aaPredicted RBP13.93□□□□□ -0.18
COL4A3-202ENST00000396578 LARS2Q15031 903 aaKnown RBP13.93□□□□□ -0.18
COL4A3-202ENST00000396578 NTRK3Q16288 839 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 P2RY8Q86VZ1 359 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 PPP1R13LQ8WUF5 828 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 SNX33Q8WV41 574 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 NXNL1Q96CM4 212 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ERLEC1Q96DZ1 483 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 CIDEBQ9UHD4 219 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 PLCL2Q9UPR0 1127 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 MMP14P50281 582 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ZBTB6Q15916 424 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ZC3H12AQ5D1E8 599 aaKnown RBP13.93□□□□□ -0.18
COL4A3-202ENST00000396578 HECTD3Q5T447 861 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 PRR23BQ6ZRT6 265 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 AHSA2Q719I0 299 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 SNX20Q7Z614 316 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 SPAG16Q8N0X2 631 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 TAS2R7Q9NYW3 318 aa13.93□□□□□ -0.18
COL4A3-202ENST00000396578 ECHS1P30084 290 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 RFX5P48382 616 aaPredicted RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 ARPC4P59998 168 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 PEX6Q13608 980 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 GLYATQ6IB77 296 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 DENND1CQ8IV53 801 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 UBR7Q8N806 425 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 HDAC10Q969S8 669 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 AASSQ9UDR5 926 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 CNOT6Q9ULM6 557 aaKnown RBP13.92□□□□□ -0.18
COL4A3-202ENST00000396578 CLDN25C9JDP6 229 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 C1QTNF3-AMACRE9PGA6 284 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 AMHP03971 560 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 SLC35G4P0C7Q5 338 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 PPP3R1P63098 170 aa13.92□□□□□ -0.18
COL4A3-202ENST00000396578 CDKL1Q00532 357 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms