RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 GALNT15Q8N3T1 639 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 DYDC1Q8WWB3 177 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 HMCESQ96FZ2 354 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 MAGEB18Q96M61 343 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 NAT9Q9BTE0 207 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 SP110Q9HB58 689 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 SMYD2Q9NRG4 433 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 MAD1L1Q9Y6D9 718 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 ADAMTS20P59510 1910 aa17.5■□□□□ 0.39
TNFSF13-205ENST00000396545 A0A1W2PR77 199 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 CXorf49A8MYA2 514 aaPredicted RBP17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 F5H423 210 aaPredicted RBP17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 SPAG7O75391 227 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 NEBLO76041 1014 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 JCHAINP01591 159 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 OXCT1P55809 520 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 SMAD1Q15797 465 aaKnown RBP17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 PIGWQ7Z7B1 504 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 CPLX4Q7Z7G2 160 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 MARCH9Q86YJ5 346 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 C4orf33Q8N1A6 199 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 FAM131CQ96AQ9 280 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 SKA1Q96BD8 255 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 ELF4Q99607 663 aaPredicted RBP17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 MLPHQ9BV36 600 aaPredicted RBP17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 CASS4Q9NQ75 786 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 FTSJ1Q9UET6 329 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 AAR2Q9Y312 384 aaKnown RBP17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 IKBKGQ9Y6K9 419 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 COL5A1P20908 1838 aaPredicted RBP17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 WNT9AO14904 365 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 ANXA9O76027 345 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 ZWINTO95229 277 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 PGAM1P18669 254 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 KRT4P19013 534 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 NFKB1P19838 968 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 MGAT1P26572 445 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 CD38P28907 300 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 PLK1P53350 603 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 GNA12Q03113 381 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 SULT2A1Q06520 285 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 CAMK2BQ13554 666 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 SHBQ15464 509 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 PRAMEF14Q5SWL7 426 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 GKAP1Q5VSY0 366 aaPredicted RBP17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 CXorf57Q6NSI4 855 aaKnown RBP17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 C6orf89Q6UWU4 347 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 SH2D5Q6ZV89 423 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 PPM1NQ8N819 430 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 BANPQ8N9N5 519 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 OR14C36Q8NHC7 312 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 FRS2Q8WU20 508 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 SEC16BQ96JE7 1060 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 AASDHPPTQ9NRN7 309 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 RAXQ9Y2V3 346 aa17.49■□□□□ 0.39
TNFSF13-205ENST00000396545 KNTC1P50748 2209 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 LATO43561 262 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 IL1BP01584 269 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 RHOCP08134 193 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 DRD3P35462 400 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 NNMTP40261 264 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 NUMBP49757 651 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 VASPP50552 380 aaPredicted RBP17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 SLC18A2Q05940 514 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 COL9A2Q14055 689 aaPredicted RBP17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 RFTN1Q14699 578 aaPredicted RBP17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 MARC1Q5VT66 337 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 ZNF449Q6P9G9 518 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 TRMT10BQ6PF06 316 aaKnown RBP17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 C19orf48Q6RUI8 117 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 RGS9BPQ6ZS82 235 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 MICALCLQ6ZW33 695 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 MARK2Q7KZI7 788 aaKnown RBP17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 GATAD2AQ86YP4 633 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 BBS5Q8N3I7 341 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 TEX26Q8N6G2 289 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 CNTD1Q8N815 330 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 SAP25Q8TEE9 199 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 OXNAD1Q96HP4 312 aaPredicted RBP17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 AGAP3Q96P47 875 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 FCRL5Q96RD9 977 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 TRIM56Q9BRZ2 755 aaKnown RBP17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 NSRP1Q9H0G5 558 aaKnown RBP17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 MLXIPLQ9NP71 852 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 SYBUQ9NX95 663 aa17.48■□□□□ 0.39
TNFSF13-205ENST00000396545 URB1O60287 2271 aaKnown RBP17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 FAM149AA5PLN7 773 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 PRAMEF11O60813 436 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 MT-ND3P03897 115 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 VIMP08670 466 aaKnown RBP17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 CA4P22748 312 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 RPA3P35244 121 aaPredicted RBP17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 METAP1P53582 386 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 SESN2P58004 480 aaPredicted RBP17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 PPP2CBP62714 309 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 PPP2CAP67775 309 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 NIPAL4Q0D2K0 466 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 NAB1Q13506 487 aa17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 FRG1Q14331 258 aaKnown RBP17.47■□□□□ 0.39
TNFSF13-205ENST00000396545 SPARCL1Q14515 664 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms