RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 TSGA13Q96PP4 275 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 TEFMQ96QE5 360 aaKnown RBP16.28■□□□□ 0.2
DDR1-229ENST00000396342 SRPK1Q96SB4 655 aaKnown RBP16.28■□□□□ 0.2
DDR1-229ENST00000396342 EFHD1Q9BUP0 239 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 MLPHQ9BV36 600 aaPredicted RBP16.28■□□□□ 0.2
DDR1-229ENST00000396342 RIOK2Q9BVS4 552 aaKnown RBP16.28■□□□□ 0.2
DDR1-229ENST00000396342 FAM83DQ9H4H8 585 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 SLC39A1Q9NY26 324 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 VPS18Q9P253 973 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 A0A087X0T9 212 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 IGHV5-10-1A0A0J9YXX1 117 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 OR5K4A6NMS3 321 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 CAPN5O15484 640 aaPredicted RBP16.27■□□□□ 0.2
DDR1-229ENST00000396342 CBFA2T2O43439 604 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 MFSD11O43934 449 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 PROSCO94903 275 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 FAM228BP0C875 321 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 TCF4P15884 667 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 ZFXP17010 805 aaPredicted RBP16.27■□□□□ 0.2
DDR1-229ENST00000396342 GM2AP17900 193 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 CD1CP29017 333 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 LIMK2P53671 638 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 DSC2Q02487 901 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 MMRN1Q13201 1228 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 TRIM14Q14142 442 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 DPYSL3Q14195 570 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 NR1D2Q14995 579 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 IQCB1Q15051 598 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 HGSNATQ68CP4 663 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 TMEM71Q6P5X7 295 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 NYAP1Q6ZVC0 841 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 CHST15Q7LFX5 561 aaPredicted RBP16.27■□□□□ 0.2
DDR1-229ENST00000396342 NRROSQ86YC3 692 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 CBARPQ8N350 705 aaPredicted RBP16.27■□□□□ 0.2
DDR1-229ENST00000396342 RCBTB1Q8NDN9 531 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 SCAMP4Q969E2 229 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 NUDT22Q9BRQ3 303 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 HERPUD2Q9BSE4 406 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 EPB41L1Q9H4G0 881 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 CBX8Q9HC52 389 aa16.27■□□□□ 0.2
DDR1-229ENST00000396342 CHD5Q8TDI0 1954 aa16.27■□□□□ 0.19
DDR1-229ENST00000396342 SYCE3A1L190 88 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 CASC3O15234 703 aaKnown RBP16.26■□□□□ 0.19
DDR1-229ENST00000396342 AKR1B10O60218 316 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 SNX2O60749 519 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 MTA2O94776 668 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 PDHA1P08559 390 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 STC1P52823 247 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 HHEXQ03014 270 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 PTSQ03393 145 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 KCNC4Q03721 635 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 NFATC3Q12968 1075 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 C16orf72Q14CZ0 275 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 PYCR3Q53H96 274 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 TXNRD3NBQ6F5E7 133 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 BZW1Q7L1Q6 419 aaKnown RBP16.26■□□□□ 0.19
DDR1-229ENST00000396342 LUZP1Q86V48 1076 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 C17orf82Q86X59 251 aaPredicted RBP16.26■□□□□ 0.19
DDR1-229ENST00000396342 TRIM48Q8IWZ4 208 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 NAGSQ8N159 534 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 PELI3Q8N2H9 469 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 MAML1Q92585 1016 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 ART4Q93070 314 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 SCARF2Q96GP6 870 aaPredicted RBP16.26■□□□□ 0.19
DDR1-229ENST00000396342 ZPBPQ9BS86 351 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 DDA1Q9BW61 102 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 TDRD1Q9BXT4 1180 aaKnown RBP16.26■□□□□ 0.19
DDR1-229ENST00000396342 FOXJ2Q9P0K8 574 aa16.26■□□□□ 0.19
DDR1-229ENST00000396342 TRBV23OR9-2A0A075B6M9 112 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 IGHV1OR21-1A0A087WYE8 117 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 KIR2DS5A0A0G2JLQ3 304 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 A0A0G2JNG1 304 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 LRRD1A4D1F6 860 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 KIR2DS3K7RE56 304 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 PPP1R12AO14974 1030 aaPredicted RBP16.25■□□□□ 0.19
DDR1-229ENST00000396342 PPFIA2O75334 1257 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 CLDN7O95471 211 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 MAPK9P45984 424 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 AP1B1Q10567 949 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 SQSTM1Q13501 440 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 KIR2DS5Q14953 304 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 PDK1Q15118 436 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 ZNF569Q5MCW4 686 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 SNAP47Q5SQN1 464 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 NKAIN2Q5VXU1 208 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 NCBP2-AS2Q69YL0 99 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 PCSK4Q6UW60 755 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 LYSMD3Q7Z3D4 306 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 TRIM74Q86UV6 250 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 VASH2Q86V25 355 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 CACNA2D3Q8IZS8 1091 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 NCSTNQ92542 709 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 EXTL1Q92935 676 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 SPATA16Q9BXB7 569 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 BRD8Q9H0E9 1235 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 IFNKQ9P0W0 207 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 PCDHGA4Q9Y5G9 962 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 PCDHGA3Q9Y5H0 932 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 HEY1Q9Y5J3 304 aa16.25■□□□□ 0.19
DDR1-229ENST00000396342 CELSR3Q9NYQ7 3312 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms