RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TBC1D10AQ9BXI6 508 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 C5AR2Q9P296 337 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 TMEM59LQ9UK28 342 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 B3GNT3Q9Y2A9 372 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 PCYT1BQ9Y5K3 369 aaPredicted RBP13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 ACANP16112 2415 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 VPS13CQ709C8 3753 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 LILRA5A6NI73 299 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 NFATC2Q13469 925 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 LRP8Q14114 963 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 ACOX1Q15067 660 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 NFKBIBQ15653 356 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 CNGA3Q16281 694 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 RWDD4Q6NW29 188 aaKnown RBP13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 FAM199XQ6PEV8 388 aaPredicted RBP13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 IGFL3Q6UXB1 125 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 KLHL6Q8WZ60 621 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 SH3KBP1Q96B97 665 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 DTD2Q96FN9 168 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 UBE2TQ9NPD8 197 aaPredicted RBP13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 B4GALT6Q9UBX8 382 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 CFAP45Q9UL16 551 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 PCDHGA10Q9Y5H3 936 aa13.55□□□□□ -0.24
VCPKMT-201ENST00000395859 MYO7BQ6PIF6 2116 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 WASH4PA8MWX3 477 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 PLEKP08567 350 aaPredicted RBP13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 ZSCAN22P10073 491 aaPredicted RBP13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 CDH5P33151 784 aaPredicted RBP13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 LRRC63Q05C16 580 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 CETN1Q12798 172 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 SKOR2Q2VWA4 1001 aaPredicted RBP13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 ARCQ7LC44 396 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 PRSS42Q7Z5A4 293 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 ELMO2Q96JJ3 720 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 CFAP57Q96MR6 1250 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 FCRL4Q96PJ5 515 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 UCK1Q9HA47 277 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 KCTD5Q9NXV2 234 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 GPR83Q9NYM4 423 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 SEMA5BQ9P283 1151 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 TBC1D29Q9UFV1 150 aa13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 COPG1Q9Y678 874 aaKnown RBP13.54□□□□□ -0.24
VCPKMT-201ENST00000395859 A8MX80 341 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 RASA4BC9J798 803 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 ZNF185O15231 689 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 RASA4O43374 803 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 TMEM63AO94886 807 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 HEXIM1O94992 359 aaKnown RBP13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 F13A1P00488 732 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 STSP08842 583 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 ETV3P41162 512 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 SEPHS1P49903 392 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 NDUFA8P51970 172 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 HDAC4P56524 1084 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 SNX16P57768 344 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 YBEYP58557 167 aaPredicted RBP13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 KRTAP10-9P60411 292 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 UBE2IP63279 158 aaKnown RBP13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 DPTQ07507 201 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 IZUMO3Q5VZ72 239 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 PWWP2BQ6NUJ5 590 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 KRBA2Q6ZNG9 492 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 ENOSF1Q7L5Y1 443 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 HSD11B1LQ7Z5J1 315 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 SRLQ86TD4 932 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 KCNMB4Q86W47 210 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 PPP1R3BQ86XI6 285 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 RTL3Q8N8U3 475 aaKnown RBP13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 SHC3Q92529 594 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 TBC1D31Q96DN5 1066 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 TSG101Q99816 390 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 ATP13A3Q9H7F0 1226 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 COPG2Q9UBF2 871 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 FARSAQ9Y285 508 aaKnown RBP13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 TMEM98Q9Y2Y6 226 aa13.53□□□□□ -0.24
VCPKMT-201ENST00000395859 FER1L5A0AVI2 2057 aa13.52□□□□□ -0.24
VCPKMT-201ENST00000395859 PIKFYVEQ9Y2I7 2098 aa13.52□□□□□ -0.24
VCPKMT-201ENST00000395859 SERPINA4P29622 427 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 SYKP43405 635 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 MAPK9P45984 424 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 MARSP56192 900 aaKnown RBP13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 ZNF235Q14590 738 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 FOXD4L6Q3SYB3 417 aaPredicted RBP13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 CFAP58Q5T655 872 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 FAM102AQ5T9C2 384 aaPredicted RBP13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 VWA5B1Q5TIE3 1220 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 SMYD5Q6GMV2 418 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 GJB7Q6PEY0 223 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 ADAMTSL4Q6UY14 1074 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 FOXD4L3Q6VB84 417 aaPredicted RBP13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 Q6ZS92 163 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 TECPR1Q7Z6L1 1165 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 SLC9B2Q86UD5 537 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 CUZD1Q86UP6 607 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 TMEM102Q8N9M5 508 aaPredicted RBP13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 COX14Q96I36 57 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 CEP63Q96MT8 703 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 SCAND2PQ9GZW5 306 aaPredicted RBP13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 LATS2Q9NRM7 1088 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms