RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SIGIRRQ6IA17 410 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 CHST3Q7LGC8 479 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 PTF1AQ7RTS3 328 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 CAMKMTQ7Z624 323 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 FOXRED2Q8IWF2 684 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 ATP6V1E2Q96A05 226 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 OTULINQ96BN8 352 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 GRAMD2BQ96HH9 432 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 APOLD1Q96LR9 279 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 SCAND2PQ9GZW5 306 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 DNAJC18Q9H819 358 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 SEBOXQ9HB31 216 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 TMEM51Q9NW97 253 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 FLRT1Q9NZU1 646 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 OSGIN1Q9UJX0 560 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 ANAPC5Q9UJX4 755 aa5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
HMGB1P10-201ENST00000395823 TMEM8BA6NDV4 472 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 GAGE12JA6NER3 117 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 B8ZZF3 427 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 MAP2K7O14733 419 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 TIMM23O14925 209 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 KLKB1P03952 638 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 FYNP06241 537 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 CCDC175P0C221 793 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 PTAFRP25105 342 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 RBP5P82980 135 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 MYBPC2Q14324 1141 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 MYLK3Q32MK0 819 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 Q4G0T1 1027 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 Q5PR19 223 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 GGNBP1Q5YKI7 109 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 NSUN5P2Q63ZY6 315 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 TMEM211Q6ICI0 200 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 SLC18B1Q6NT16 456 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 METTL2BQ6P1Q9 378 aaKnown RBP5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 TEX38Q6PEX7 206 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 B3GNT6Q6ZMB0 384 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 Q6ZSV7 163 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 CACNA2D4Q7Z3S7 1137 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 YTHDF3Q7Z739 585 aaKnown RBP5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 GLRX5Q86SX6 157 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 PIP4P1Q86T03 277 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 CEP57Q86XR8 500 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 ANKRD13BQ86YJ7 626 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 EPHX4Q8IUS5 362 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 CNGA4Q8IV77 575 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 OR8H3Q8N146 312 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 PI4KAP1Q8N8J0 262 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 RBM15BQ8NDT2 890 aaKnown RBP5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 CFAP61Q8NHU2 1237 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 GSDMBQ8TAX9 411 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 TEKT4Q8WW24 435 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 DDB2Q92466 427 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 MRPS27Q92552 414 aaKnown RBP5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 RHBDF1Q96CC6 855 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 METTL2AQ96IZ6 378 aaKnown RBP5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 ZNF830Q96NB3 372 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 RTN4RQ9BZR6 473 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 PRSS22Q9GZN4 317 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 SPATC1LQ9H0A9 340 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 PCED1AQ9H1Q7 454 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 TASP1Q9H6P5 420 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 GRPEL1Q9HAV7 217 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 OLAHQ9NV23 265 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 HAO2Q9NYQ3 351 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 OR14J1Q9UGF5 321 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 AMACRQ9UHK6 382 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 ZNHIT2Q9UHR6 403 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 HACL1Q9UJ83 578 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 TUBE1Q9UJT0 475 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 RCOR1Q9UKL0 485 aa5.03□□□□□ -1.6
HMGB1P10-201ENST00000395823 CGB1A6NKQ9 187 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 KDM4EB2RXH2 506 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 PI4K2BG5E9Z4 385 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 M0QZ24 198 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 WNT9BO14905 357 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 PLPP2O43688 288 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 RBMXL2O75526 392 aaKnown RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 DDNO94850 711 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 EPN2O95208 641 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 ZWINTO95229 277 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 FGF2P09038 288 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 CD58P19256 250 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 MCCP23508 829 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 GPTP24298 496 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 TLX1P31314 330 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 HNRNPH1P31943 449 aaKnown RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 GP5P40197 560 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 CCR10P46092 362 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 RFX5P48382 616 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 RASSF2P50749 326 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 CSE1LP55060 971 aaKnown RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 CDH13P55290 713 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 ST3GAL1Q11201 340 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 BFSP1Q12934 665 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 TRAF1Q13077 416 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 CTTNQ14247 550 aaKnown RBP5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 COLEC12Q5KU26 742 aa5.02□□□□□ -1.61
HMGB1P10-201ENST00000395823 LCN10Q6JVE6 187 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms