RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SNX2O60749 519 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 KATNA1O75449 491 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 DNAJB5O75953 348 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 HPRP00739 348 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 CYBBP04839 570 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 ENO2P09104 434 aaPredicted RBP10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 UROSP10746 265 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 JUNBP17275 347 aaPredicted RBP10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 CAPN3P20807 821 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 GSK3BP49841 420 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 MRPS6P82932 125 aaKnown RBP10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 CLCQ05315 142 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 IL10RBQ08334 325 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 MOGQ16653 247 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 UPP1Q16831 310 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 PARP15Q460N3 678 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 ZNF789Q5FWF6 425 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 RBM48Q5RL73 367 aaKnown RBP10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 MSANTD2Q6P1R3 559 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 USP50Q70EL3 339 aaPredicted RBP10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 KDELC2Q7Z4H8 507 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 ANKRD23Q86SG2 305 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 EPHX4Q8IUS5 362 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 CMTR2Q8IYT2 770 aaKnown RBP10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 SFRP1Q8N474 314 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 NKAPQ8N5F7 415 aaKnown RBP10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 COX4I2Q96KJ9 171 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 C3orf30Q96M34 536 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 GAD1Q99259 594 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 SLC39A3Q9BRY0 314 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 C1QTNF3Q9BXJ4 246 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 BRINP2Q9C0B6 783 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 POLR1BQ9H9Y6 1135 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 IL1RL2Q9HB29 575 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 FBRSL1Q9HCM7 1045 aaKnown RBP10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 TNFRSF12AQ9NP84 129 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 CATSPERZQ9NTU4 200 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 AIG1Q9NVV5 245 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 TAS2R13Q9NYV9 303 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 POLG2Q9UHN1 485 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 ZNF639Q9UID6 485 aa10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 TIMM13Q9Y5L4 95 aaPredicted RBP10.01□□□□□ -0.81
UBE2D3-208ENST00000394803 NYNRINQ9P2P1 1898 aaKnown RBP10□□□□□ -0.81
UBE2D3-208ENST00000394803 LOC285095A0A1B0GVY8 99 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 FAM234BA2RU67 622 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 IQCA1LA6NCM1 817 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 TRIM64BA6NI03 449 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 SUPT3HB4E1H0 165 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 FXYD1O00168 92 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 KPNA6O60684 536 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 SUPT3HO75486 399 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 SLC22A3O75751 556 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 CDH1P12830 882 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 TYMPP19971 482 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 PBX3P40426 434 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 CDH15P55291 814 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 LIPEQ05469 1076 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 RAB39AQ14964 217 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 PFKFB4Q16877 469 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 SIRPB2Q5JXA9 342 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 BROXQ5VW32 411 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 ZNF773Q6PK81 442 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 CYHR1Q6ZMK1 362 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 PHYKPLQ8IUZ5 450 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 RYBPQ8N488 228 aaPredicted RBP10□□□□□ -0.81
UBE2D3-208ENST00000394803 OR52K2Q8NGK3 314 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 BRSK1Q8TDC3 778 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 EXT2Q93063 718 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 TADA1Q96BN2 335 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 PTERQ96BW5 349 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 NSMCE2Q96MF7 247 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 ZNF599Q96NL3 588 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 ATOH8Q96SQ7 321 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 AARSD1Q9BTE6 412 aaKnown RBP10□□□□□ -0.81
UBE2D3-208ENST00000394803 LRRC3Q9BY71 257 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 POLR1EQ9GZS1 481 aaKnown RBP10□□□□□ -0.81
UBE2D3-208ENST00000394803 FBXO44Q9H4M3 255 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 RPF2Q9H7B2 306 aaKnown RBP10□□□□□ -0.81
UBE2D3-208ENST00000394803 AGO3Q9H9G7 860 aaKnown RBP10□□□□□ -0.81
UBE2D3-208ENST00000394803 TMEM30AQ9NV96 361 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10□□□□□ -0.813e-8■■■□□ 18.1
UBE2D3-208ENST00000394803 EGFL7Q9UHF1 273 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 GNPTGQ9UJJ9 305 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 GPR45Q9Y5Y3 372 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 HS3ST4Q9Y661 456 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 SLC30A1Q9Y6M5 507 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 ANKRD36A6QL64 1941 aa10□□□□□ -0.81
UBE2D3-208ENST00000394803 LCHNA4D1U4 455 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 ARL5CA6NH57 179 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 H3BMQ9 156 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 M0QZQ0 153 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 PLOD2O00469 737 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 EI24O14681 340 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 GPR182O15218 404 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 BAIAP3O94812 1187 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 SEC24DO94855 1032 aaPredicted RBP9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 CPNE6O95741 557 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 SLC4A1P02730 911 aa9.99□□□□□ -0.81
UBE2D3-208ENST00000394803 PRR35P0CG20 571 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms