RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 UBXN8O00124 270 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 AZIN1O14977 448 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 ANGPT2O15123 496 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 TPST1O60507 370 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 PFDN1O60925 122 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 OXTRP30559 389 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 RENBPP51606 427 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 CTBSQ01459 385 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 OR4D1Q15615 310 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 PIK3R6Q5UE93 754 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 DHRS4L2Q6PKH6 230 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 GPR141Q7Z602 305 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 TFAP2DQ7Z6R9 452 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 METTL23Q86XA0 190 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 HASPINQ8TF76 798 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 HMCESQ96FZ2 354 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 FEM1CQ96JP0 617 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC45A3Q96JT2 553 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 NSUN5Q96P11 429 aaKnown RBP18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 KCNA7Q96RP8 456 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 TSEN34Q9BSV6 310 aaKnown RBP18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 TUBB1Q9H4B7 451 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 VPS45Q9NRW7 570 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 EBF1Q9UH73 591 aa18.3■□□□□ 0.52
PCDHA1-202ENST00000394633 A0A087WXM4 84 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 LDB2O43679 373 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 HAPLN1P10915 354 aaPredicted RBP18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC6A2P23975 617 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 MLLT6P55198 1093 aaPredicted RBP18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 NRG1Q02297 640 aaPredicted RBP18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 MERTKQ12866 999 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 BNIP2Q12982 314 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 ATP6AP1Q15904 470 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 KANK2Q63ZY3 851 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 TTC33Q6PID6 262 aaPredicted RBP18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 CD300LGQ6UXG3 332 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 CLVS1Q8IUQ0 354 aaPredicted RBP18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 CMTR2Q8IYT2 770 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 ADGRG5Q8IZF4 528 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 LZICQ8WZA0 190 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 TRIM8Q9BZR9 551 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 MUC3BQ9H195 1237 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 ACTR3BQ9P1U1 418 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 PADI3Q9ULW8 664 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 KIAA0100Q14667 2235 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 TNFRSF10BO14763 440 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 MGEA5O60502 916 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 CYP11A1P05108 521 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 MTHFD2P13995 350 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 IL10P22301 178 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 PSMA4P25789 261 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 GEN1Q17RS7 908 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 MARC1Q5VT66 337 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 DDIASQ8IXT1 998 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC43A3Q8NBI5 491 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 ISOC1Q96CN7 298 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 LRRC58Q96CX6 371 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 MYRFLQ96LU7 910 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 TBATAQ96M53 351 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 ASB2Q96Q27 587 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC52A3Q9NQ40 469 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 RHBDL2Q9NX52 303 aa18.29■□□□□ 0.52
PCDHA1-202ENST00000394633 TRIM64A6NGJ6 449 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 ARPC2O15144 300 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 B3GAT3O94766 335 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 MATN4O95460 622 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 FASP25445 335 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 STT3AP46977 705 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 CCT8P50990 548 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 MBTPS1Q14703 1052 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 PFKFB4Q16877 469 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC36A3Q495N2 470 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 ZBED5Q49AG3 693 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 UMODL1-AS1Q8N2C9 162 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 ADAMTS16Q8TE57 1224 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 PABPC5Q96DU9 382 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 RNF208Q9H0X6 261 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 DNAAF2Q9NVR5 837 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 UXTQ9UBK9 157 aaPredicted RBP18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 POLG2Q9UHN1 485 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 PTBP2Q9UKA9 531 aaKnown RBP18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 GIT1Q9Y2X7 761 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 PCDHA9Q9Y5H5 950 aa18.28■□□□□ 0.52
PCDHA1-202ENST00000394633 A0A1W2PQH9 124 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 ACOX3O15254 700 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 ATXN1LP0C7T5 689 aaKnown RBP18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 SLC2A3P11169 496 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 CKBP12277 381 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 SEMA3AQ14563 771 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 PTPRCAPQ14761 206 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 TRAF7Q6Q0C0 670 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 SPRED1Q7Z699 444 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 PGBD5Q8N414 524 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 GOLM1Q8NBJ4 401 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 TNIP2Q8NFZ5 429 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 GFM2Q969S9 779 aaKnown RBP18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 TUBGCP3Q96CW5 907 aa18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 CENPNQ96H22 339 aaPredicted RBP18.27■□□□□ 0.52
PCDHA1-202ENST00000394633 C9orf16Q9BUW7 83 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms