RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 MKLN1Q9UL63 735 aa8.59□□□□□ -1.03
GABRA1-202ENST00000393943 DUSP12Q9UNI6 340 aa8.59□□□□□ -1.03
GABRA1-202ENST00000393943 SESN1Q9Y6P5 492 aa8.59□□□□□ -1.03
GABRA1-202ENST00000393943 FAM149AA5PLN7 773 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 A8MT66 165 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 STX16-NPEPL1H3BU86 382 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 K7EPI3 171 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 GPR25O00155 361 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 MATN3O15232 486 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 GRIA1P42261 906 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 MAGEA3P43357 314 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 WNT3AP56704 352 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 MCCD1P59942 119 aaPredicted RBP8.59□□□□□ -1.04
GABRA1-202ENST00000393943 ZNF181Q2M3W8 571 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 RAB43Q86YS6 212 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 MICALL2Q8IY33 904 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 PARP8Q8N3A8 854 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 SLC35F5Q8WV83 523 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 ITCHQ96J02 903 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 C12orf42Q96LP6 360 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 COQ7Q99807 217 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 MRPL45Q9BRJ2 306 aaKnown RBP8.59□□□□□ -1.04
GABRA1-202ENST00000393943 SLC25A51Q9H1U9 297 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.59□□□□□ -1.04
GABRA1-202ENST00000393943 SPATA7Q9P0W8 599 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 TMCC3Q9ULS5 477 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 HSPE1-MOB4S4R3N1 261 aa8.59□□□□□ -1.04
GABRA1-202ENST00000393943 NHSQ6T4R5 1651 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 CCDC182A6NF36 153 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 VTNP04004 478 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 ENO2P09104 434 aaPredicted RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 HTR1EP28566 365 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 CHRNA5P30532 468 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 HNRNPFP52597 415 aaKnown RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 CDC42P60953 191 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 DLG2Q15700 870 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 TRIQKQ629K1 86 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 XKR5Q6UX68 686 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 CRYBG2Q8N1P7 616 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 SPPL2BQ8TCT7 592 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 MCOLN3Q8TDD5 553 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 SPON2Q9BUD6 331 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 MMP27Q9H306 513 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 FBXO44Q9H4M3 255 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 EHD3Q9NZN3 535 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 STOML2Q9UJZ1 356 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 FNDC3AQ9Y2H6 1198 aaKnown RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 TCRBV5S1A1TA0A578 114 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 C5orf58C9J3I9 102 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 WNT10BO00744 389 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 RAMP2O60895 175 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 EPN2O95208 641 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 STT3AP46977 705 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 GSK3BP49841 420 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 GNA12Q03113 381 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 CLCQ05315 142 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 CBLBQ13191 982 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 LY6KQ17RY6 165 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 TSTD2Q5T7W7 516 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 CHADLQ6NUI6 762 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 DHRS4L2Q6PKH6 230 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 OLIG1Q8TAK6 271 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 C9orf43Q8TAL5 461 aaPredicted RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 ISL2Q96A47 359 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 CDK5RAP1Q96SZ6 601 aaKnown RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 COLEC11Q9BWP8 271 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 PDZD7Q9H5P4 517 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 LIN28AQ9H9Z2 209 aaKnown RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 PHF11Q9UIL8 331 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 PCDHB8Q9UN66 801 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 C9IYK1 514 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 G3V2L1 256 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 H3BMQ9 156 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 BOLA2-SMG1P6H3BVE0 249 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 IRF6O14896 467 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 PHLPP1O60346 1717 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 MPZL2O60487 215 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 PAPSS2O95340 614 aaPredicted RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 LINC00032P0C843 101 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 ZNF7P17097 686 aaPredicted RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 RFC2P35250 354 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 ZNF45Q02386 682 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 ANGPT1Q15389 498 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 SH3PXD2AQ5TCZ1 1133 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 C9orf57Q5W0N0 161 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 CYP4Z1Q86W10 505 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 ADAM32Q8TC27 787 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 KCTD13Q8WZ19 329 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 AP3S1Q92572 193 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 MYRFLQ96LU7 910 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 COG8Q96MW5 612 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 GLIS2Q9BZE0 524 aaPredicted RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 NXF3Q9H4D5 531 aaKnown RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 ELOVL6Q9H5J4 265 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 GPN2Q9H9Y4 310 aaPredicted RBP8.58□□□□□ -1.04
GABRA1-202ENST00000393943 KRT84Q9NSB2 600 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 FBXW11Q9UKB1 542 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 ERVK-11Q9UQG0 969 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 GIT1Q9Y2X7 761 aa8.58□□□□□ -1.04
GABRA1-202ENST00000393943 PSAT1Q9Y617 370 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms