RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 DLGAP3O95886 979 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 CTPS1P17812 591 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 LRP8Q14114 963 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 ATP1A1-AS1Q5TC04 95 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 LRRC66Q68CR7 880 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 MARK2Q7KZI7 788 aaKnown RBP15.27■□□□□ 0.04
CHMP3-202ENST00000393773 ZNF765Q7L2R6 523 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 OR10G6Q8NH81 332 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 PIH1D2Q8WWB5 315 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 SCAMP4Q969E2 229 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 AP2M1Q96CW1 435 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 AHCYL2Q96HN2 611 aaKnown RBP15.27■□□□□ 0.04
CHMP3-202ENST00000393773 COX14Q96I36 57 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 PCMTD1Q96MG8 357 aaPredicted RBP15.27■□□□□ 0.04
CHMP3-202ENST00000393773 SMIM14Q96QK8 99 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 AGAP2Q99490 1192 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 SLC38A3Q99624 504 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 ABCG8Q9H221 673 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 APMAPQ9HDC9 416 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 SIDT1Q9NXL6 827 aaKnown RBP15.27■□□□□ 0.04
CHMP3-202ENST00000393773 LIMA1Q9UHB6 759 aaKnown RBP15.27■□□□□ 0.04
CHMP3-202ENST00000393773 MAN2B2Q9Y2E5 1009 aa15.27■□□□□ 0.04
CHMP3-202ENST00000393773 TNRC6AQ8NDV7 1962 aaKnown RBP15.27■□□□□ 0.03
CHMP3-202ENST00000393773 MYO9AB2RTY4 2548 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 MN1Q10571 1320 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-202ENST00000393773 A6NCN8 305 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 A8MU76 341 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 TMCO5BA8MYB1 307 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 FZD6O60353 706 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 STK17BO94768 372 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 PDHA1P08559 390 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 ATP1A3P13637 1013 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 FERP16591 822 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 MAP4P27816 1152 aaKnown RBP15.26■□□□□ 0.03
CHMP3-202ENST00000393773 HHEXQ03014 270 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 ABHD18Q0P651 414 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 DPYSL2Q16555 572 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 CRTC2Q53ET0 693 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-202ENST00000393773 LACTB2Q53H82 288 aaPredicted RBP15.26■□□□□ 0.03
CHMP3-202ENST00000393773 RALGPS1Q5JS13 557 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 SNAP47Q5SQN1 464 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 ARMC12Q5T9G4 340 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 CEACAM20Q6UY09 585 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 APTXQ7Z2E3 356 aaKnown RBP15.26■□□□□ 0.03
CHMP3-202ENST00000393773 GALNT13Q8IUC8 556 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 ABHD17AQ96GS6 310 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 ZPBPQ9BS86 351 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 ZWILCHQ9H900 591 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 SARS2Q9NP81 518 aaKnown RBP15.26■□□□□ 0.03
CHMP3-202ENST00000393773 FBXO8Q9NRD0 319 aa15.26■□□□□ 0.03
CHMP3-202ENST00000393773 TRBV23OR9-2A0A075B6M9 112 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 DNAJC6O75061 913 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 RNF8O76064 485 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 TCF4P15884 667 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 IL1R2P27930 398 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 STAT5AP42229 794 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 MMP13P45452 471 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 SMTNL2Q2TAL5 461 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 DEFB109BQ30KR1 87 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 PPP1R2P3Q6NXS1 205 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 TMCO3Q6UWJ1 677 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 IRF2BP2Q7Z5L9 587 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 POLNQ7Z5Q5 900 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 FAM26EQ8N5C1 309 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 ATPAF2Q8N5M1 289 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 APOBEC4Q8WW27 367 aaKnown RBP15.25■□□□□ 0.03
CHMP3-202ENST00000393773 MIB2Q96AX9 1013 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 EFHD1Q9BUP0 239 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 VPS18Q9P253 973 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 TBC1D29Q9UFV1 150 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 PLAAQ9Y263 795 aa15.25■□□□□ 0.03
CHMP3-202ENST00000393773 OAS3Q9Y6K5 1087 aaKnown RBP15.25■□□□□ 0.03
CHMP3-202ENST00000393773 A0A0J9YYE9 177 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 PRR19A6NJB7 356 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 H3BRJ5 948 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 TRBC1P01850 177 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 ZNF30P17039 623 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 AMPD1P23109 780 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 MAN1A1P33908 653 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 CD97P48960 835 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 STC1P52823 247 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 EPHA4P54764 986 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 CDH6P55285 790 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 PTSQ03393 145 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 UBXN1Q04323 297 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 MAP7Q14244 749 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 IHHQ14623 411 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 NLRP8Q86W28 1048 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 BBS5Q8N3I7 341 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 CSPG4P5Q96PW8 444 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 PSMG3-AS1Q96PY0 264 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 TP53TG5Q9Y2B4 290 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 PRKAB1Q9Y478 270 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 MRPS18BQ9Y676 258 aaKnown RBP15.24■□□□□ 0.03
CHMP3-202ENST00000393773 SHANK1Q9Y566 2161 aa15.24■□□□□ 0.03
CHMP3-202ENST00000393773 INPP4BO15327 924 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 PYGLP06737 847 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 ANKRD34CP0C6C1 535 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 NR1D1P20393 614 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 F8A1P23610 371 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms