RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 USP53Q70EK8 1073 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 SRLQ86TD4 932 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 VSIG1Q86XK7 387 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 PELI3Q8N2H9 469 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 TSEN2Q8NCE0 465 aaKnown RBP18.63■□□□□ 0.57
SNCB-202ENST00000393693 OR6C4Q8NGE1 309 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 OR56A4Q8NGH8 313 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 ATL2Q8NHH9 583 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 EXTL1Q92935 676 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 MAK16Q9BXY0 300 aaKnown RBP18.63■□□□□ 0.57
SNCB-202ENST00000393693 TMEM168Q9H0V1 697 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 CLMPQ9H6B4 373 aa18.63■□□□□ 0.57
SNCB-202ENST00000393693 FEZ2Q9UHY8 353 aaPredicted RBP18.63■□□□□ 0.57
SNCB-202ENST00000393693 LRP4O75096 1905 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 PRAMEF33A0A0G2JMD5 474 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 B4DGG1 531 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 FGF10O15520 208 aaPredicted RBP18.62■□□□□ 0.57
SNCB-202ENST00000393693 PRAMEF10O60809 474 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 GLB1P16278 677 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 GM2AP17900 193 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 CDKN2BP42772 138 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 CDH6P55285 790 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 TPI1P60174 286 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 KCNC4Q03721 635 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 ZFP36L1Q07352 338 aaKnown RBP18.62■□□□□ 0.57
SNCB-202ENST00000393693 TFDP2Q14188 446 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 CA9Q16790 459 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 CERCAMQ5T4B2 595 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 LIPIQ6XZB0 460 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 PRICKLE2Q7Z3G6 844 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 VASH2Q86V25 355 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 ZFAND4Q86XD8 727 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 TTC13Q8NBP0 860 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 RAPGEF5Q92565 580 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 MAGOHBQ96A72 148 aaKnown RBP18.62■□□□□ 0.57
SNCB-202ENST00000393693 SGF29Q96ES7 293 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 NSMCE3Q96MG7 304 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 PEBP4Q96S96 227 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 LRRC1Q9BTT6 524 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 LGR4Q9BXB1 951 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.62■□□□□ 0.57
SNCB-202ENST00000393693 FOXJ2Q9P0K8 574 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 LRIT1Q9P2V4 623 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 MOSPD1Q9UJG1 213 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 APPL1Q9UKG1 709 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 ACSL6Q9UKU0 697 aa18.62■□□□□ 0.57
SNCB-202ENST00000393693 hCG_1818297A0A087WSY0 165 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 ZNF487B1APH4 448 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 CACNB4O00305 520 aaPredicted RBP18.61■□□□□ 0.57
SNCB-202ENST00000393693 NVLO15381 856 aaKnown RBP18.61■□□□□ 0.57
SNCB-202ENST00000393693 WISP1O95388 367 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 LIPCP11150 499 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 FNTAP49354 379 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 NDST2P52849 883 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 MAPK10P53779 464 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 KIAA1024LP59773 190 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 NFKB2Q00653 900 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 DHX34Q14147 1143 aaKnown RBP18.61■□□□□ 0.57
SNCB-202ENST00000393693 HLTFQ14527 1009 aaKnown RBP eCLIP18.61■□□□□ 0.57
SNCB-202ENST00000393693 CYP1B1Q16678 543 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 C14orf28Q4W4Y0 310 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 ARHGAP36Q6ZRI8 547 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 SPRED1Q7Z699 444 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 USP7Q93009 1102 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 TUBGCP5Q96RT8 1024 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 SNRNP25Q9BV90 132 aaKnown RBP18.61■□□□□ 0.57
SNCB-202ENST00000393693 HEMGNQ9BXL5 484 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 FRMD8P1Q9BZ68 369 aaPredicted RBP18.61■□□□□ 0.57
SNCB-202ENST00000393693 DDX47Q9H0S4 455 aaKnown RBP18.61■□□□□ 0.57
SNCB-202ENST00000393693 DPEP2Q9H4A9 486 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 CYP4F12Q9HCS2 524 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 AP4E1Q9UPM8 1137 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 MYO18BQ8IUG5 2567 aa18.61■□□□□ 0.57
SNCB-202ENST00000393693 TTC24A2A3L6 582 aaPredicted RBP18.6■□□□□ 0.57
SNCB-202ENST00000393693 WT1P19544 449 aaPredicted RBP18.6■□□□□ 0.57
SNCB-202ENST00000393693 SERPINA4P29622 427 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 CSNK1DP48730 415 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 KLF1Q13351 362 aaPredicted RBP18.6■□□□□ 0.57
SNCB-202ENST00000393693 CCNG2Q16589 344 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 TAZQ16635 292 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 KAZNQ674X7 775 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 RFX6Q8HWS3 928 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 PRELID2Q8N945 189 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.6■□□□□ 0.57
SNCB-202ENST00000393693 GRK7Q8WTQ7 553 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 ECHDC3Q96DC8 303 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 PARD6BQ9BYG5 372 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 TRIM4Q9C037 500 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 SEMA6CQ9H3T2 930 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 ATP13A3Q9H7F0 1226 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 SUDS3Q9H7L9 328 aaPredicted RBP18.6■□□□□ 0.57
SNCB-202ENST00000393693 ANKZF1Q9H8Y5 726 aa18.6■□□□□ 0.57
SNCB-202ENST00000393693 ANKRD36A6QL64 1941 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 CFAP69A5D8W1 941 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 FAM187AA6NFU0 413 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 ARHGAP42A6NI28 874 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 C3orf70A6NLC5 250 aaPredicted RBP18.59■□□□□ 0.57
SNCB-202ENST00000393693 C9orf172C9J069 976 aa18.59■□□□□ 0.57
SNCB-202ENST00000393693 EEF2KO00418 725 aaKnown RBP18.59■□□□□ 0.57
SNCB-202ENST00000393693 B4GAT1O43505 415 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms