RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 C6orf203Q9P0P8 240 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 PRAMEF1O95521 474 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ARRB1P49407 418 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 HNMTP50135 292 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 MAXP61244 160 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 DSC2Q02487 901 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 KCNC3Q14003 757 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CCSAPQ6IQ19 270 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 DET1Q7L5Y6 550 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ZNF572Q7Z3I7 529 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ZNF598Q86UK7 904 aaKnown RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CPXM2Q8N436 756 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 FOXJ1Q92949 421 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 FAM120BQ96EK7 910 aaKnown RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 TRIB3Q96RU7 358 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 THUMPD3Q9BV44 507 aaKnown RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 SEMA3GQ9NS98 782 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CCT8L1PA6NM43 557 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 PAPSS2O95340 614 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 EPOP01588 193 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 SSTR1P30872 391 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 PDE1CQ14123 709 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 XKR6Q5GH73 641 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 OXR1Q8N573 874 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 PTGR2Q8N8N7 351 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 FNDC5Q8NAU1 212 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 SELENOMQ8WWX9 145 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 TMEM120AQ9BXJ8 343 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CCDC134Q9H6E4 229 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 VPS4AQ9UN37 437 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CDC14AQ9UNH5 594 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 RAP2CQ9Y3L5 183 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 EDIL3O43854 480 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 BGNP21810 368 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 MGAT3Q09327 533 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 TERF2Q15554 542 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 NCBP2-AS2Q69YL0 99 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 IL27RAQ6UWB1 636 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 MARK2Q7KZI7 788 aaKnown RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 OR4K2Q8NGD2 314 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 XYLT2Q9H1B5 865 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ALG9Q9H6U8 611 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CCDC177Q9NQR7 707 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 BBIP1A8MTZ0 92 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 CDK14O94921 469 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 EPN2O95208 641 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 DLDP09622 509 aaKnown RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 EEF1B2P24534 225 aaKnown RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 S100A3P33764 101 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 DGKEP52429 567 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 MRPS22P82650 360 aaKnown RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 NRG1Q02297 640 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 CSTF3Q12996 717 aaKnown RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 DSELQ8IZU8 1212 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 TCP10LQ8TDR4 215 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 POPDC3Q9HBV1 291 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 SGK2Q9HBY8 427 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 HMGXB4Q9UGU5 601 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 DDX60LQ5H9U9 1706 aaKnown RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 LINC01553A4QN01 128 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 COCHO43405 550 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 TGM5O43548 720 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 SKAP2O75563 359 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 RASGRP1O95267 797 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 CPSF4O95639 269 aaKnown RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 CRHR1P34998 444 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 CCDC157Q569K6 752 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 RHBDF2Q6PJF5 856 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 TDRPQ86YL5 185 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 KCTD14Q9BQ13 255 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 GKN1Q9NS71 199 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 ZNF780BQ9Y6R6 833 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 ZNF840PA6NDX5 716 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 OR5K4A6NMS3 321 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 ULK1O75385 1050 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 HOXA9P31269 272 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 AQP5P55064 265 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 PKNOX1P55347 436 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 CHRNB3Q05901 458 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 ASTE1Q2TB18 679 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 C10orf62Q5T681 223 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 LONP2Q86WA8 852 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 TEX9Q8N6V9 391 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 DNAJB8Q8NHS0 232 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 MIPOL1Q8TD10 442 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 THOC1Q96FV9 657 aaKnown RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 NUSAP1Q9BXS6 441 aaKnown RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 TNKS2Q9H2K2 1166 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 HRH2P25021 359 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 TIE1P35590 1138 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 RPS21P63220 83 aaKnown RBP8.07□□□□□ -1.12
ATXN3-203ENST00000393287 DSC1Q08554 894 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 ZNF844Q08AG5 666 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 TXNDC8Q6A555 127 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 ERP27Q96DN0 273 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 RANBP9Q96S59 729 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 TMEM109Q9BVC6 243 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 UGT2B28Q9BY64 529 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 AURKCQ9UQB9 309 aa8.07□□□□□ -1.12
ATXN3-203ENST00000393287 MEIS3P2A8K0S8 358 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms