RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 A0A087WZY1 265 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 A0A1W2PRX2 142 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 GAGE10A6NGK3 116 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ADARB2-AS1A8MUL3 147 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 PPIP5K2O43314 1243 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TLX2O43763 284 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 ASGR1P07306 291 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 UBTFL6P0CB48 400 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 TROVE2P10155 538 aaKnown RBP eCLIP3.55□□□□□ -1.84
XRN1-202ENST00000392981 GPTP24298 496 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 KLRC2P26717 231 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SLC8A1P32418 973 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TRHRP34981 398 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 CRHR1P34998 444 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 KRT2P35908 639 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SUMO2P61956 95 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 SLC39A14Q15043 492 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TRADDQ15628 312 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 STK11Q15831 433 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 HIST2H2ACQ16777 129 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 AAK1Q2M2I8 961 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 NADK2Q4G0N4 442 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 MSANTD2Q6P1R3 559 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 PAPD4Q6PIY7 484 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 ADAMTSL2Q86TH1 951 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TXNRD3Q86VQ6 643 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 FAM114A1Q8IWE2 563 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 C11orf65Q8NCR3 313 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TTC9Q92623 222 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SYN2Q92777 582 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 SPSB1Q96BD6 273 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SGF29Q96ES7 293 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 PDLIM5Q96HC4 596 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 PGAM5Q96HS1 289 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 MEGF10Q96KG7 1140 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ZNF570Q96NI8 536 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 AGAP3Q96P47 875 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 MEAF6Q9HAF1 191 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TM9SF3Q9HD45 589 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ANAPC2Q9UJX6 822 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CDC14AQ9UNH5 594 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CGB1A6NKQ9 187 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TTC34A8MYJ7 566 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 NEMFO60524 1076 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 GASTP01350 101 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ZNF182P17025 639 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 NOS3P29474 1203 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 PTGS2P35354 604 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 BMPR1AP36894 532 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ZNF134P52741 427 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 RPL15P61313 204 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 ECT2LQ008S8 904 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 DHX34Q14147 1143 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 UBAP2LQ14157 1087 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 UBXN2BQ14CS0 331 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SLC18A3Q16572 532 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SLC36A3Q495N2 470 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CCDC122Q5T0U0 273 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ALS2CLQ60I27 953 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TEPPQ6URK8 271 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 C19orf35Q6ZS72 473 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 EFL1Q7Z2Z2 1120 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 TLK2Q86UE8 772 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ELOA2Q8IYF1 753 aaPredicted RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 ARFGAP2Q8N6H7 521 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 FAM133AQ8N9E0 248 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 OR52K1Q8NGK4 314 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 OR10T2Q8NGX3 314 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 EXD1Q8NHP7 514 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 GIMAP1Q8WWP7 306 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 FIG4Q92562 907 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 RFKQ969G6 155 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 MARS2Q96GW9 593 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 GPR20Q99678 358 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 EFHD1Q9BUP0 239 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 MRPL1Q9BYD6 325 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 RMND5AQ9H871 391 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ASNSD1Q9NWL6 643 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 OR6C3Q9NZP0 311 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 IPO11Q9UI26 975 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 ACSL6Q9UKU0 697 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 LIPT1Q9Y234 373 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 NCKAP1Q9Y2A7 1128 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ZBTB1Q9Y2K1 713 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 KLHL18O94889 574 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CAMTA2O94983 1202 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ALDOCP09972 364 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 TAGLN2P37802 199 aaKnown RBP3.55□□□□□ -1.84
XRN1-202ENST00000392981 SLC6A12P48065 614 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 TRAF1Q13077 416 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ZNF273Q14593 569 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 FBLN7Q53RD9 439 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 FAM47AQ5JRC9 791 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CEP170Q5SW79 1584 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 C6orf183Q5T699 404 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 CDK20Q8IZL9 346 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 ARHGAP18Q8N392 663 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 SLC24A4Q8NFF2 622 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 LRRC20Q8TCA0 184 aa3.55□□□□□ -1.84
XRN1-202ENST00000392981 RLN3Q8WXF3 142 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms