RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 CENPLQ8N0S6 344 aaPredicted RBP16.46■□□□□ 0.23
SNX9-201ENST00000392185 CNBD2Q96M20 576 aa16.46■□□□□ 0.23
SNX9-201ENST00000392185 OSBPL7Q9BZF2 842 aa16.46■□□□□ 0.23
SNX9-201ENST00000392185 TLR9Q9NR96 1032 aa16.46■□□□□ 0.23
SNX9-201ENST00000392185 ATP6V1B2P21281 511 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 HSPA7P48741 367 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 C2orf27AQ580R0 203 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 TBCELQ5QJ74 424 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 LY6G5CQ5SRR4 150 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 OTUD3Q5T2D3 398 aaPredicted RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 UBAP2Q5T6F2 1119 aaKnown RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 TMEM154Q6P9G4 183 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 CLDN19Q8N6F1 224 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 ZNF614Q8N883 585 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 KLK6Q92876 244 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 NSMCE2Q96MF7 247 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 ELAC1Q9H777 363 aaKnown RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 TRIM45Q9H8W5 580 aaPredicted RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 COL6A2P12110 1019 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 IVDP26440 423 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 RBM20Q5T481 1227 aaKnown RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 MFSD4BQ5TF39 518 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 YTHDF3Q7Z739 585 aaKnown RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 ZNF598Q86UK7 904 aaKnown RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 PACS2Q86VP3 889 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 RAVER1Q8IY67 606 aaKnown RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 FAM9CQ8IZT9 166 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 SIDT2Q8NBJ9 832 aaKnown RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 C1QTNF7Q9BXJ2 289 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 RWDD3Q9Y3V2 267 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 TRBV23OR9-2A0A075B6M9 112 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 MAGEC1O60732 1142 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 LRATO95237 230 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 SERPINA6P08185 405 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 ECHS1P30084 290 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 ATP6V1E1P36543 226 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 CACNG1Q06432 222 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 XKR6Q5GH73 641 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 NAT14Q8WUY8 206 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 INPP5DQ92835 1189 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 TBC1D30Q9Y2I9 924 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 RP1L1Q8IWN7 2480 aaPredicted RBP16.45■□□□□ 0.22
SNX9-201ENST00000392185 ECM29Q5VYK3 1845 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 RGSL1A5PLK6 1076 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 CHRNGP07510 517 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 SEC13P55735 322 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 PIK3R6Q5UE93 754 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 MBLAC2Q68D91 279 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 PAQR3Q6TCH7 311 aa16.45■□□□□ 0.22
SNX9-201ENST00000392185 ZNF840PA6NDX5 716 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 FAM159BA6NKW6 160 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 DCLK1O15075 740 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 DNTTP04053 509 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 SNRPB2P08579 225 aaKnown RBP16.44■□□□□ 0.22
SNX9-201ENST00000392185 MAT2AP31153 395 aaKnown RBP16.44■□□□□ 0.22
SNX9-201ENST00000392185 NRIP1P48552 1158 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 NEK3P51956 506 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 TIGD2Q4W5G0 525 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 ZBTB49Q6ZSB9 765 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 DHFR2Q86XF0 187 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 CLHC1Q8NHS4 586 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 ZNF778Q96MU6 729 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 FKBP6O75344 327 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 TCEA3O75764 348 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 OTCP00480 354 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 APODP05090 189 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 PIK3R1P27986 724 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 DEFB103AP81534 67 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 AP5B1Q2VPB7 878 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 OR14C36Q8NHC7 312 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 AGAP11Q8TF27 550 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 CCDC3Q9BQI4 270 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 CTSEP14091 401 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 IGFBP6P24592 240 aaPredicted RBP16.44■□□□□ 0.22
SNX9-201ENST00000392185 ECT2LQ008S8 904 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 PEX6Q13608 980 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 FBXO46Q6PJ61 603 aaPredicted RBP16.44■□□□□ 0.22
SNX9-201ENST00000392185 ASZ1Q8WWH4 475 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 NAF1Q96HR8 494 aaKnown RBP16.44■□□□□ 0.22
SNX9-201ENST00000392185 MIR1-1HGQ9H1L0 117 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 IMP3Q9NV31 184 aaKnown RBP16.44■□□□□ 0.22
SNX9-201ENST00000392185 STK39Q9UEW8 545 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 LIMD1Q9UGP4 676 aa16.44■□□□□ 0.22
SNX9-201ENST00000392185 ARAP2Q8WZ64 1704 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 M0QZQ0 153 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 KPNA5O15131 536 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 ALBP02768 609 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 HPCAP84074 193 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 VAC14Q08AM6 782 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 MAD2L1Q13257 205 aaPredicted RBP16.43■□□□□ 0.22
SNX9-201ENST00000392185 CAPRIN2Q6IMN6 1127 aaKnown RBP16.43■□□□□ 0.22
SNX9-201ENST00000392185 IYDQ6PHW0 289 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 SCD5Q86SK9 330 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 BBS7Q8IWZ6 715 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 RNF145Q96MT1 663 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 SUV39H2Q9H5I1 410 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 STN1Q9H668 368 aaKnown RBP16.43■□□□□ 0.22
SNX9-201ENST00000392185 KCNE2Q9Y6J6 123 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 KIAA1551Q9HCM1 1747 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 LAMB1P07942 1786 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms