RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 PORCNQ9H237 461 aa16.95■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TIMM13Q9Y5L4 95 aaPredicted RBP16.95■□□□□ 0.3
TRAF3IP1-202ENST00000391993 G3V2L1 256 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NME4O00746 187 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 FFAR3O14843 346 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 GPR42O15529 346 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 L1CAMP32004 1257 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CCR1P32246 355 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CLYBLQ8N0X4 340 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 FBXO39Q8N4B4 442 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TWIST2Q8WVJ9 160 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 RPL3LQ92901 407 aaKnown RBP16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 VAT1Q99536 393 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 UGT2B28Q9BY64 529 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 WDCPQ9H6R7 721 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SETD4Q9NVD3 440 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 DHX15O43143 795 aaKnown RBP16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TMCC2O75069 709 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 MYF6P23409 242 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 PTGS2P35354 604 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ARSFP54793 590 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 C1QTNF8P60827 252 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 LRRC74AQ0VAA2 488 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 KCNAB2Q13303 367 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TIFABQ6ZNK6 161 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SP8Q8IXZ3 490 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SVOPQ8N4V2 548 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NIPA2Q8N8Q9 360 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 OTULINQ96BN8 352 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 MTFMTQ96DP5 389 aaKnown RBP16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 USP22Q9UPT9 525 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 WBP4O75554 376 aaKnown RBP16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ANXA6P08133 673 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NUDT6P53370 316 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TRAP1Q12931 704 aaKnown RBP16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NAB1Q13506 487 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 HSDL1Q3SXM5 330 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 LINC00523Q86TU6 105 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 OR10A6Q8NH74 314 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 LILRB4Q8NHJ6 448 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SPATA33Q96N06 139 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 MYOCQ99972 504 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SPON2Q9BUD6 331 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NDFIP2Q9NV92 336 aa16.94■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 UNCXA6NJT0 531 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 HCRTO43612 131 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 GPIP06744 558 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 DGKEP52429 567 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 RPS3AP61247 264 aaKnown RBP16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SULT1C3Q6IMI6 304 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 HMBOX1Q6NT76 420 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ERAP2Q6P179 960 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 IL27RAQ6UWB1 636 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 DET1Q7L5Y6 550 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 C16orf62Q7Z3J2 963 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TMEM126BQ8IUX1 230 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 BIRC7Q96CA5 298 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NECTIN4Q96NY8 510 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 C2orf40Q9H1Z8 148 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ACTR8Q9H981 624 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NT5MQ9NPB1 228 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CCM2LQ9NUG4 571 aaPredicted RBP16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 RIC8BQ9NVN3 520 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CPA4Q9UI42 421 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SPATA2Q9UM82 520 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SYNDIG1LA6NDD5 238 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 PEX10O60683 326 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 DNTTP04053 509 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SLC26A3P40879 764 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 GPD2P43304 727 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ATN1P54259 1190 aaPredicted RBP16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 GNG2P59768 71 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 IL18R1Q13478 541 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 LRP8Q14114 963 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 INAVAQ3KP66 663 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NOMO2Q5JPE7 1267 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 RBM20Q5T481 1227 aaKnown RBP16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 RAB43Q86YS6 212 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SLC22A9Q8IVM8 553 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 BEST2Q8NFU1 509 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 SPPL2BQ8TCT7 592 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 STON2Q8WXE9 905 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 FDXACB1Q9BRP7 624 aaPredicted RBP16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ST6GALNAC4Q9H4F1 302 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ERVK-18Q9QC07 812 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 MALT1Q9UDY8 824 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 LRRC14BA6NHZ5 514 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 NDUFS3O75489 264 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CNTN2Q02246 1040 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 TFAP2DQ7Z6R9 452 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 QKIQ96PU8 341 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ERVK13-1Q9NX77 482 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CCDC182A6NF36 153 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 C12orf71A8MTZ7 269 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 BTN3A3O00478 584 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 ACOT8O14734 319 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 CHRNB1P11230 501 aa16.93■□□□□ 0.3
TRAF3IP1-202ENST00000391993 DGKQP52824 942 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms