RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 IFI44Q8TCB0 444 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 OXNAD1Q96HP4 312 aaPredicted RBP12.61□□□□□ -0.39
GGPS1-203ENST00000391855 COX14Q96I36 57 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 MRGPRX2Q96LB1 330 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 ZSCAN5AQ9BUG6 496 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 CARD9Q9H257 536 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 RMI1Q9H9A7 625 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 UBP1Q9NZI7 540 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 U3KQA8 63 aa12.61□□□□□ -0.39
GGPS1-203ENST00000391855 PTPRBP23467 1997 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 JUPP14923 745 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 HMGCLP35914 325 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 RPS6KA1Q15418 735 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 SLC1A5Q15758 541 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 ZNF569Q5MCW4 686 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 AADACL2Q6P093 401 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 RFLNAQ6ZTI6 216 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 EFL1Q7Z2Z2 1120 aaKnown RBP12.6□□□□□ -0.39
GGPS1-203ENST00000391855 KDELC2Q7Z4H8 507 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 TAF8Q7Z7C8 310 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 IPMKQ8NFU5 416 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 SLC35B2Q8TB61 432 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 DTX3LQ8TDB6 740 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 SCARF2Q96GP6 870 aaPredicted RBP12.6□□□□□ -0.39
GGPS1-203ENST00000391855 PLEKHG4BQ96PX9 1271 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 OR2M4Q96R27 311 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 CAAP1Q9H8G2 361 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 MRPL40Q9NQ50 206 aaKnown RBP12.6□□□□□ -0.39
GGPS1-203ENST00000391855 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.6□□□□□ -0.39
GGPS1-203ENST00000391855 FEZ2Q9UHY8 353 aaPredicted RBP12.6□□□□□ -0.39
GGPS1-203ENST00000391855 PADI4Q9UM07 663 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 GPR34Q9UPC5 381 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 CLCA2Q9UQC9 943 aa12.6□□□□□ -0.39
GGPS1-203ENST00000391855 A0A0U1RQS6 177 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 C5orf60A6NFR6 353 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 C1QTNF9BB2RNN3 333 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 GPR89AB7ZAQ6 455 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 OPA1O60313 960 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 PPFIA2O75334 1257 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 CELA2BP08218 269 aaPredicted RBP12.59□□□□□ -0.39
GGPS1-203ENST00000391855 C1QTNF9P0C862 333 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 GPR89BP0CG08 455 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 GNPDA1P46926 289 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 INSM1Q01101 510 aaPredicted RBP12.59□□□□□ -0.39
GGPS1-203ENST00000391855 LRP8Q14114 963 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 P3H1Q32P28 736 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 SIRPB2Q5JXA9 342 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 MEI1Q5TIA1 1274 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 PDCD7Q8N8D1 485 aaKnown RBP12.59□□□□□ -0.39
GGPS1-203ENST00000391855 KDF1Q8NAX2 398 aaPredicted RBP12.59□□□□□ -0.39
GGPS1-203ENST00000391855 MAPK15Q8TD08 544 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 GPBAR1Q8TDU6 330 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 ANP32BQ92688 251 aaKnown RBP12.59□□□□□ -0.39
GGPS1-203ENST00000391855 GRAMD1AQ96CP6 724 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 NXPE2Q96DL1 559 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 DEPDC7Q96QD5 511 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 WDR24Q96S15 920 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 AGAP2Q99490 1192 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 TMEM168Q9H0V1 697 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 ABCG4Q9H172 646 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 LZTFL1Q9NQ48 299 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 SUFUQ9UMX1 484 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 SHOC2Q9UQ13 582 aa12.59□□□□□ -0.39
GGPS1-203ENST00000391855 CPED1A4D0V7 1026 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 TCEA3O75764 348 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 ASMTLO95671 621 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 SLC4A1P02730 911 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 PIRTP0C851 137 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 PSMB4P28070 264 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 CDCP2Q5VXM1 449 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 KCTD16Q68DU8 428 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 GUSBP11Q6P575 273 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 OGFOD3Q6PK18 319 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 DOK6Q6PKX4 331 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 ARHGEF18Q6ZSZ5 1173 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 GLT6D1Q7Z4J2 308 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 SLC13A5Q86YT5 568 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-203ENST00000391855 GALNT13Q8IUC8 556 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 PHYKPLQ8IUZ5 450 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 KLHDC8BQ8IXV7 354 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 DCBLD1Q8N8Z6 715 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 KYQ8NBH2 561 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 FAM46DQ8NEK8 389 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 GPR156Q8NFN8 814 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 MAIP1Q8WWC4 291 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 ZCCHC14Q8WYQ9 949 aaKnown RBP12.58□□□□□ -0.4
GGPS1-203ENST00000391855 EID2BQ96D98 161 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 FAM118BQ9BPY3 351 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 FICDQ9BVA6 458 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 SPATA16Q9BXB7 569 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 GULP1Q9UBP9 304 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 DKK4Q9UBT3 224 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 PPP2R2CQ9Y2T4 447 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 SPO11Q9Y5K1 396 aa12.58□□□□□ -0.4
GGPS1-203ENST00000391855 FADS2P1A8MWK0 482 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 INPP4BO15327 924 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 PSMD3O43242 534 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 MT-CO3P00414 261 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 PNLIPP16233 465 aa12.57□□□□□ -0.4
GGPS1-203ENST00000391855 BPIP17213 487 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms