RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 TPBGLP0DKB5 382 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 CEBPBP17676 345 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 IMPDH1P20839 514 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 HNF1BP35680 557 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 CCR10P46092 362 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 GALNT1Q10472 559 aaPredicted RBP25.08■■□□□ 1.61
SHOX2-201ENST00000389589 CARD16Q5EG05 197 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 ADGRG2Q8IZP9 1017 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 KIRREL3Q8IZU9 778 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 NKAPQ8N5F7 415 aaKnown RBP25.08■■□□□ 1.61
SHOX2-201ENST00000389589 AGR3Q8TD06 166 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 UTP4Q969X6 686 aaKnown RBP25.08■■□□□ 1.61
SHOX2-201ENST00000389589 PTERQ96BW5 349 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 LYSMD1Q96S90 227 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 ACSS2Q9NR19 701 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.08■■□□□ 1.61
SHOX2-201ENST00000389589 APPL1Q9UKG1 709 aa25.08■■□□□ 1.61
SHOX2-201ENST00000389589 FNDC3AQ9Y2H6 1198 aaKnown RBP25.08■■□□□ 1.61
SHOX2-201ENST00000389589 POP4O95707 220 aaKnown RBP25.08■■□□□ 1.6
SHOX2-201ENST00000389589 ENO1P06733 434 aaKnown RBP25.08■■□□□ 1.6
SHOX2-201ENST00000389589 KCNA5P22460 613 aa25.08■■□□□ 1.6
SHOX2-201ENST00000389589 LONP2Q86WA8 852 aa25.08■■□□□ 1.6
SHOX2-201ENST00000389589 KIAA1958Q8N8K9 716 aa25.08■■□□□ 1.6
SHOX2-201ENST00000389589 L3HYPDHQ96EM0 354 aa25.08■■□□□ 1.6
SHOX2-201ENST00000389589 TTC1Q99614 292 aa25.08■■□□□ 1.6
SHOX2-201ENST00000389589 TRMOQ9BU70 441 aa25.08■■□□□ 1.6
SHOX2-201ENST00000389589 PIDD1Q9HB75 910 aa25.08■■□□□ 1.6
SHOX2-201ENST00000389589 CYP4F12Q9HCS2 524 aa25.08■■□□□ 1.6
SHOX2-201ENST00000389589 FAM50BQ9Y247 325 aa25.08■■□□□ 1.6
SHOX2-201ENST00000389589 A0A0U1RQS6 177 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 A0A1W2PQ67 120 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 PRR5-ARHGAP8B1AHC4 643 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 GYG2O15488 501 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 ERVK-21P61565 698 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 ARHGAP8P85298 464 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 UBAP2LQ14157 1087 aaKnown RBP25.07■■□□□ 1.6
SHOX2-201ENST00000389589 CDKN3Q16667 212 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 ACCSLQ4AC99 568 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 SLC9B1Q4ZJI4 515 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 SETMARQ53H47 684 aaPredicted RBP25.07■■□□□ 1.6
SHOX2-201ENST00000389589 PAQR3Q6TCH7 311 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 KIAA0907Q7Z7F0 614 aaPredicted RBP25.07■■□□□ 1.6
SHOX2-201ENST00000389589 MAPK15Q8TD08 544 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 ECHDC3Q96DC8 303 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 ZNF641Q96N77 438 aaPredicted RBP25.07■■□□□ 1.6
SHOX2-201ENST00000389589 SUV39H2Q9H5I1 410 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 TCF7L2Q9NQB0 619 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 PPIL1Q9Y3C6 166 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 MTF2Q9Y483 593 aaPredicted RBP25.07■■□□□ 1.6
SHOX2-201ENST00000389589 WNT6Q9Y6F9 365 aa25.07■■□□□ 1.6
SHOX2-201ENST00000389589 CCDC189A1A4V9 331 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 GOLGA8CPA6NN73 597 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 GRXCR1A8MXD5 290 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 GRID2O43424 1007 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 SNCBQ16143 134 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 SPNS2Q8IVW8 549 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 PLPP6Q8IY26 295 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 AHI1Q8N157 1196 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 CBARPQ8N350 705 aaPredicted RBP25.06■■□□□ 1.6
SHOX2-201ENST00000389589 AFAP1L2Q8N4X5 818 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 CELF5Q8N6W0 485 aaKnown RBP25.06■■□□□ 1.6
SHOX2-201ENST00000389589 ING5Q8WYH8 240 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 KCNJ9Q92806 393 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 KIAA1191Q96A73 305 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 FAR2Q96K12 515 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 GPR21Q99679 349 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 PCDHB1Q9Y5F3 818 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 SPECC1L-ADORA2AF8WAN1 911 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 WEE1P30291 646 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 KCNC1P48547 511 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 CCNHP51946 323 aaPredicted RBP25.06■■□□□ 1.6
SHOX2-201ENST00000389589 PTPN5P54829 565 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 CTSL3PQ5NE16 218 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 UGT3A1Q6NUS8 523 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 FRMD7Q6ZUT3 714 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 RBM23Q86U06 439 aaKnown RBP25.06■■□□□ 1.6
SHOX2-201ENST00000389589 ADIPOR2Q86V24 386 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 KDM1BQ8NB78 822 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 STAG3L4Q8TBR4 150 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 GRIN3AQ8TCU5 1115 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 PHF21BQ96EK2 531 aa25.06■■□□□ 1.6
SHOX2-201ENST00000389589 TRMT6Q9UJA5 497 aaKnown RBP25.06■■□□□ 1.6
SHOX2-201ENST00000389589 OR1I1O60431 355 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 CLDN7O95471 211 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 ATP6V1G2O95670 118 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 LYPLAL1Q5VWZ2 237 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 GRAMD4Q6IC98 578 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 ACAD11Q709F0 780 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 SNX20Q7Z614 316 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 RAB44Q7Z6P3 723 aaPredicted RBP25.05■■□□□ 1.6
SHOX2-201ENST00000389589 TEX9Q8N6V9 391 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 SMG7Q92540 1137 aaKnown RBP25.05■■□□□ 1.6
SHOX2-201ENST00000389589 SCRN2Q96FV2 425 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 P2RY12Q9H244 342 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 ATG2AQ2TAZ0 1938 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 TRPC5OSA6NMA1 111 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 PRAMEF1O95521 474 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 POLR2EP19388 210 aaKnown RBP25.05■■□□□ 1.6
SHOX2-201ENST00000389589 NCF2P19878 526 aaPredicted RBP25.05■■□□□ 1.6
SHOX2-201ENST00000389589 ITGALP20701 1170 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms