RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 PRMT3O60678 531 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 SOAT2O75908 522 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 SLITRK5O94991 958 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 NDUFA7O95182 113 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ATP1A1P05023 1023 aaKnown RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 IGKV5-2P06315 115 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 MMP2P08253 660 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CSF3P09919 207 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 RAB40ALP0C0E4 278 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CFC1BP0CG36 223 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 GLI4P10075 376 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 THRAP10827 490 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 VDRP11473 427 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 TCF3P15923 654 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ACO1P21399 889 aaKnown RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PRKCHP24723 683 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ACVR2AP27037 513 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ABCD3P28288 659 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CDC25AP30304 524 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 SLC8A1P32418 973 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 MC3RP41968 323 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 GATA4P43694 442 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 SLC26A2P50443 739 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 BLKP51451 505 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CTSCP53634 463 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CLDN2P57739 230 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 DCDC1P59894 354 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 DYNLL1P63167 89 aaKnown RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 SLC35A2P78381 396 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PMP22Q01453 160 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ENPEPQ07075 957 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 EGFEM1PQ0D2K5 195 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 FAPQ12884 760 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 NNTQ13423 1086 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ENPP2Q13822 863 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ZNF234Q14588 700 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 MESDQ14696 234 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 UBE3CQ15386 1083 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 MGAT5BQ3V5L5 792 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CCDC38Q502W7 563 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PPP4R3BQ5MIZ7 849 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CERCAMQ5T4B2 595 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 TMCO4Q5TGY1 634 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PRAMEF13Q5VWM6 474 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 NKAIN2Q5VXU1 208 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 IZUMO3Q5VZ72 239 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CCDC102BQ68D86 513 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 OR6B2Q6IFH4 312 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CENPPQ6IPU0 288 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 DENND5AQ6IQ26 1287 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ZNF280DQ6N043 979 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ZNF585AQ6P3V2 769 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CYB5D1Q6P9G0 228 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 C16orf86Q6ZW13 317 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PPP1R3BQ86XI6 285 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 VRK3Q8IV63 474 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 AMOTL1Q8IY63 956 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CKAP2LQ8IYA6 745 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 RBFAQ8N0V3 343 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 RPRMLQ8N4K4 120 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ENDOVQ8N8Q3 282 aaKnown RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ZNF441Q8N8Z8 693 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ZNF540Q8NDQ6 660 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ZNF740Q8NDX6 193 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 FAM46DQ8NEK8 389 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 APPL2Q8NEU8 664 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 OTUD7AQ8TE49 926 aaPredicted RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 C10orf105Q8TEF2 133 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 TEKT4Q8WW24 435 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 R3HDM4Q96D70 268 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 SLC47A1Q96FL8 570 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 FAM46AQ96IP4 442 aaKnown RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 EAF1Q96JC9 268 aaPredicted RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 TBATAQ96M53 351 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 OR6C1Q96RD1 312 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 SLC22A12Q96S37 553 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 EIF3CQ99613 913 aaKnown RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 SEPT5Q99719 369 aaPredicted RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PSD2Q9BQI7 771 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 KRTAP4-2Q9BYR5 136 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 NLNQ9BYT8 704 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 BACH2Q9BYV9 841 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 TRIM6Q9C030 488 aaPredicted RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CIPCQ9C0C6 399 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 LHPPQ9H008 270 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 RACGAP1Q9H0H5 632 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 HIPK2Q9H2X6 1198 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CPVLQ9H3G5 476 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 DPEP2Q9H4A9 486 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PHAXQ9H814 394 aaKnown RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PRSS16Q9NQE7 514 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 UTP3Q9NQZ2 479 aaKnown RBP eCLIP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PNPLA3Q9NST1 481 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 DNAJC11Q9NVH1 559 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 ANKRD10Q9NXR5 420 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 PTTG2Q9NZH5 202 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CFAP97Q9P2B7 532 aa1□□□□□ -2.25
RNU6-42P-201ENST00000384165 UXTQ9UBK9 157 aaPredicted RBP1□□□□□ -2.25
RNU6-42P-201ENST00000384165 CACNG4Q9UBN1 327 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms