RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 BRAT1Q6PJG6 821 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 RBMS3Q6XE24 437 aaKnown RBP2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 QSOX2Q6ZRP7 698 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SUGP1Q8IWZ8 645 aaKnown RBP2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 MYCT1Q8N699 235 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 C11orf65Q8NCR3 313 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ACVR1CQ8NER5 493 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 HMGCLL1Q8TB92 370 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ELP4Q96EB1 424 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 QRFPRQ96P65 431 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 MPHOSPH8Q99549 860 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 OPRPNQ99935 248 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PLEKHA4Q9H4M7 779 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SLC7A10Q9NS82 523 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 C20orf141Q9NUB4 165 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 POLG2Q9UHN1 485 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ACSL5Q9ULC5 683 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 RIPOR2Q9Y4F9 1068 aa2.35□□□□□ -2.03
RNU6-1040P-201ENST00000383974 IGKV6D-41A0A0C4DH26 115 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 A0A0J9YWU9 116 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ZCWPW2A0A1B0GU75 182 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 PSMD14O00487 310 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ARHGEF9O43307 516 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TSPAN3O60637 253 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 EGFP01133 1207 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TFP02787 698 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 KRT9P35527 623 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CSRP3P50461 194 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CSNK2A1P68400 391 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SORDQ00796 357 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 RUNX1T1Q06455 604 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 FOXM1Q08050 763 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SPOCK1Q08629 439 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TMEM187Q14656 261 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 RNPS1Q15287 305 aaKnown RBP2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ZNF239Q16600 458 aaKnown RBP2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TECRLQ5HYJ1 363 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 FRG2Q64ET8 278 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TXNDC8Q6A555 127 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TMEM81Q6P7N7 255 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CPLX2Q6PUV4 134 aaKnown RBP2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ZNF704Q6ZNC4 412 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SLC46A3Q7Z3Q1 461 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ADSSL1Q8N142 457 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 CSNK2A3Q8NEV1 391 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 TNIP2Q8NFZ5 429 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ZNF473Q8WTR7 871 aaKnown RBP2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 RHBDF1Q96CC6 855 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ORAI1Q96D31 301 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 GRAMD2BQ96HH9 432 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SENP5Q96HI0 755 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 LINC00479Q96M42 142 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 NEUROD6Q96NK8 337 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 SEBOXQ9HB31 216 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 HSPB7Q9UBY9 170 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 ERVK-11Q9UQG0 969 aa2.34□□□□□ -2.03
RNU6-1040P-201ENST00000383974 KIAA1210Q9ULL0 1709 aa2.34□□□□□ -2.04
RNU6-1040P-201ENST00000383974 A0A0G2JLW4 131 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 TEX22C9J3V5 150 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 EIF3DO15371 548 aaKnown RBP eCLIP2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 URODP06132 367 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 HOXA13P31271 388 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 AHRP35869 848 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 MAP2K2P36507 400 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 PAPOLAP51003 745 aaKnown RBP2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 TAS2R38P59533 333 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 PLIN5Q00G26 463 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 NAE1Q13564 534 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 TDGQ13569 410 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 ITGA9Q13797 1035 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 ZC2HC1CQ53FD0 456 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 ANO5Q75V66 913 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 SPICE1Q8N0Z3 855 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 BEST3Q8N1M1 668 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 ANKRD52Q8NB46 1076 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 FAM222BQ8WU58 562 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 ARHGEF26Q96DR7 871 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 SLC41A2Q96JW4 573 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 FAM110AQ9BQ89 295 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 REEP2Q9BRK0 252 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 TRIM15Q9C019 465 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 BICC1Q9H694 974 aaKnown RBP2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 C2orf42Q9NWW7 574 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 MARCH4Q9P2E8 410 aaPredicted RBP2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 CACNG5Q9UF02 275 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 TAGLN3Q9UI15 199 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 KLHL20Q9Y2M5 609 aa2.33□□□□□ -2.04
RNU6-1040P-201ENST00000383974 GOLGA6L10A0A0M3HER8 536 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 TCERG1O14776 1098 aaKnown RBP2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 NCAM2O15394 837 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 SPINT2O43291 252 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 CAVIN2O95810 425 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 CSF2RAP15509 400 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 DPEP1P16444 411 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 GPD2P43304 727 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 FASLGP48023 281 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 SLC12A1Q13621 1099 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 WDR45BQ5MNZ6 344 aa2.32□□□□□ -2.04
RNU6-1040P-201ENST00000383974 PQLC2Q6ZP29 291 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms