RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 C3orf67Q6ZVT6 689 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PEG10Q86TG7 708 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF558Q96NG5 402 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 DEFB118Q96PH6 123 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLC38A2Q96QD8 506 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 EPB41L4BQ9H329 900 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 WDR26Q9H7D7 661 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 KCNQ5Q9NR82 932 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PCDH10Q9P2E7 1040 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 TSR3Q9UJK0 312 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 MRPS17Q9Y2R5 130 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SPEF1Q9Y4P9 236 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 KCNE2Q9Y6J6 123 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 COL5A3P25940 1745 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SH3D21A4FU49 640 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 F5H5T6 163 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 POLRMTO00411 1230 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 FPGTO14772 594 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PLA2G6O60733 806 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 KRT33AO76009 404 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SERPINF2P08697 491 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 EPCAMP16422 314 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 MLLT3P42568 568 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ASMTP46597 345 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 TGM3Q08188 693 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 GAS6Q14393 721 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 MTF1Q14872 753 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CTC1Q2NKJ3 1217 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 KLHL22Q53GT1 634 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 FAM199XQ6PEV8 388 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLC43A2Q8N370 569 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PARP8Q8N3A8 854 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLC4A11Q8NBS3 891 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ANKRD49Q8WVL7 239 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 BAP1Q92560 729 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 DPF2Q92785 391 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CGRRF1Q99675 332 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 OSBPL7Q9BZF2 842 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 POPDC3Q9HBV1 291 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ARHGAP28Q9P2N2 729 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CRLS1Q9UJA2 301 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 TRIM49BA6NDI0 452 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 RGS13O14921 159 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 KCNH1O95259 989 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 GNRH1P01148 92 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CSF3P09919 207 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLC6A4P31645 630 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PPP4CP60510 307 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 OR7G1Q8NGA0 311 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 MDM1Q8TC05 714 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SPOCK2Q92563 424 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CENPIQ92674 756 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 DPYSL5Q9BPU6 564 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 C1QTNF7Q9BXJ2 289 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 LHX5Q9H2C1 402 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 TMEM165Q9HC07 324 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 IL1RAPQ9NPH3 570 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 TMEM138Q9NPI0 162 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 AHSPQ9NZD4 102 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 CDC40O60508 579 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 EPB42P16452 691 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 GPD1P21695 349 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 UQCRC1P31930 480 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PTGER2P43116 358 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 MFSD10Q14728 455 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 EPHA10Q5JZY3 1008 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 NBPF12Q5TAG4 269 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PIK3R6Q5UE93 754 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 AGAP7PQ5VUJ5 663 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLC25A24Q6NUK1 477 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PNCKQ6P2M8 343 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLCO6A1Q86UG4 719 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 FAM228AQ86W67 206 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 EEF2KMTQ96G04 330 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 WNK4Q96J92 1243 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 PPP1R10Q96QC0 940 aaKnown RBP4.87□□□□□ -1.63
PTPRD-203ENST00000381196 REEP1Q9H902 201 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SLAMF7Q9NQ25 335 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ARHGAP20Q9P2F6 1191 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 SSR3Q9UNL2 185 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 ASTN1O14525 1302 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 MYO18BQ8IUG5 2567 aa4.87□□□□□ -1.63
PTPRD-203ENST00000381196 BCLAF3A2AJT9 711 aaKnown RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 AP5Z1O43299 807 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 B3GAT3O94766 335 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 CDH1P12830 882 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 GSTM3P21266 225 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 PPM1AP35813 382 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 CCNFP41002 786 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 NPTX2P47972 431 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 CCT3P49368 545 aaKnown RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 HLCSP50747 726 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 MYBPC1Q00872 1141 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 FASTKQ14296 549 aaKnown RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 RBBP7Q16576 425 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 RALGPS1Q5JS13 557 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 ABRAQ8N0Z2 381 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 FBXO36Q8NEA4 188 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 ISOC1Q96CN7 298 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 TRIB3Q96RU7 358 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms