RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 TLR1Q15399 786 aa12.65□□□□□ -0.38
TTC39B-202ENST00000380850 DBN1Q16643 649 aa12.65□□□□□ -0.38
TTC39B-202ENST00000380850 PTRHD1Q6GMV3 140 aaKnown RBP12.65□□□□□ -0.38
TTC39B-202ENST00000380850 MRNIPQ6NTE8 343 aa12.65□□□□□ -0.38
TTC39B-202ENST00000380850 C19orf60Q96EN9 201 aa12.65□□□□□ -0.38
TTC39B-202ENST00000380850 HGH1Q9BTY7 390 aa12.65□□□□□ -0.38
TTC39B-202ENST00000380850 VPS45Q9NRW7 570 aa12.65□□□□□ -0.38
TTC39B-202ENST00000380850 SCML2Q9UQR0 700 aa12.65□□□□□ -0.38
TTC39B-202ENST00000380850 RNF103-CHMP3A0A140T963 221 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 FAM155AB1AL88 458 aaPredicted RBP12.64□□□□□ -0.39
TTC39B-202ENST00000380850 ANGPT2O15123 496 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 ECI2O75521 394 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 VNN2O95498 520 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 SF1Q15637 639 aaKnown RBP12.64□□□□□ -0.39
TTC39B-202ENST00000380850 AP5B1Q2VPB7 878 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 KIAA0930Q6ICG6 404 aaPredicted RBP12.64□□□□□ -0.39
TTC39B-202ENST00000380850 ANKRD46Q86W74 232 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 APCDD1Q8J025 514 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 LZTR1Q8N653 840 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 ACTRT2Q8TDY3 377 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 CANT1Q8WVQ1 401 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 IRGQQ8WZA9 623 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 DNAJC15Q9Y5T4 150 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 AP4B1Q9Y6B7 739 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 LOC285556D6RIA3 1793 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 KANSL1LA0AUZ9 987 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 SCAMP1O15126 338 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 ACSL4O60488 711 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 GSSP48637 474 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 SLC11A2P49281 568 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 POU4F1Q01851 419 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 TRAF2Q12933 501 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 RAB44Q7Z6P3 723 aaPredicted RBP12.64□□□□□ -0.39
TTC39B-202ENST00000380850 RETREG3Q86VR2 466 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 FNDC5Q8NAU1 212 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 PGAP3Q96FM1 320 aaPredicted RBP12.64□□□□□ -0.39
TTC39B-202ENST00000380850 PRICKLE1Q96MT3 831 aaPredicted RBP12.64□□□□□ -0.39
TTC39B-202ENST00000380850 SERPINI1Q99574 410 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 TRIM4Q9C037 500 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 ANGPTL3Q9Y5C1 460 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 C1orf232A0A0U1RR37 186 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 AGRPO00253 132 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 FBP2O00757 339 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 TMCC1O94876 653 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 PBLDP30039 288 aaPredicted RBP12.64□□□□□ -0.39
TTC39B-202ENST00000380850 UFM1P61960 85 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 MRPS35P82673 323 aaKnown RBP12.64□□□□□ -0.39
TTC39B-202ENST00000380850 MSANTD2Q6P1R3 559 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 TSPAN33Q86UF1 283 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 HMGCLL1Q8TB92 370 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 CNDP1Q96KN2 507 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 C17orf80Q9BSJ5 609 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 COQ10BQ9H8M1 238 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 ZBTB26Q9HCK0 441 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 MKS1Q9NXB0 559 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 TRMT6Q9UJA5 497 aaKnown RBP12.64□□□□□ -0.39
TTC39B-202ENST00000380850 MID2Q9UJV3 735 aa12.64□□□□□ -0.39
TTC39B-202ENST00000380850 C15orf38-AP3S2A0A0A6YYH1 394 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 ZNF487B1APH4 448 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 PLOD2O00469 737 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 NR4A1P22736 598 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 CSKP41240 450 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 MTTPP55157 894 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 MTPNP58546 118 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 SATB1Q01826 763 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 HSPA14Q0VDF9 509 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 LAPTM4AQ15012 233 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 TRIP4Q15650 581 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-202ENST00000380850 HECTD3Q5T447 861 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 C16orf89Q6UX73 402 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 ARPINQ7Z6K5 226 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 C2orf73Q8N5S3 287 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-202ENST00000380850 SLC22A17Q8WUG5 538 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 SLC29A1Q99808 456 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 HIPK3Q9H422 1215 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 TRPM5Q9NZQ8 1165 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 DNMT3LQ9UJW3 386 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 MAGED1Q9Y5V3 778 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-202ENST00000380850 SLC30A1Q9Y6M5 507 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 CLDN7O95471 211 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 IGLV3-25P01717 112 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 GRIA2P42262 883 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 CTSOP43234 321 aaPredicted RBP12.63□□□□□ -0.39
TTC39B-202ENST00000380850 NFYCQ13952 458 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 BOP1Q14137 746 aaKnown RBP12.63□□□□□ -0.39
TTC39B-202ENST00000380850 ARHGEF7Q14155 803 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 PLCL1Q15111 1095 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 MANEALQ5VSG8 457 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 IL27RAQ6UWB1 636 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 GALNT10Q86SR1 603 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 TMEM169Q96HH4 297 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 RTKNQ9BST9 563 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 GSTO2Q9H4Y5 243 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 LTB4R2Q9NPC1 389 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 FARSBQ9NSD9 589 aaKnown RBP12.63□□□□□ -0.39
TTC39B-202ENST00000380850 SRRDQ9UH36 339 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 CPQQ9Y646 472 aa12.63□□□□□ -0.39
TTC39B-202ENST00000380850 A0A1W2PRU2 124 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms