RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 ZNF510Q9Y2H8 683 aa12.58□□□□□ -0.4
VPS16-202ENST00000380445 UBDO15205 165 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 SNAP91O60641 907 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 KERAO60938 352 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 VPS26AO75436 327 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 OLFM2O95897 454 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 CD160O95971 181 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 MC4RP32245 332 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 CLCN4P51793 760 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 UNC50Q53HI1 259 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 RETSATQ6NUM9 610 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 LINGO4Q6UY18 593 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 BNC2Q6ZN30 1099 aaPredicted RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 ARMCX6Q7L4S7 300 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 TMEM150AQ86TG1 271 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 HPS6Q86YV9 775 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 PTGR2Q8N8N7 351 aaPredicted RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 DCAF4L2Q8NA75 395 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 SLC26A7Q8TE54 656 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 CCDC124Q96CT7 223 aaKnown RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 CYP2S1Q96SQ9 504 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 MRPL1Q9BYD6 325 aaKnown RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 POLR3BQ9NW08 1133 aaPredicted RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 ATP11BQ9Y2G3 1177 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 PKP3Q9Y446 797 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 MAP3K13O43283 966 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 BAG2O95816 211 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 FGF4P08620 206 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 GFAPP14136 432 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 MZF1P28698 734 aaPredicted RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 POLE2P56282 527 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 AP1S1P61966 158 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 TRAF2Q12933 501 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 PTPRNQ16849 979 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 PPM1LQ5SGD2 360 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 FAM117BQ6P1L5 589 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 METTL3Q86U44 580 aaKnown RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 STK40Q8N2I9 435 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 EFHBQ8N7U6 833 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 ARL14EPQ8N8R7 260 aaPredicted RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 ATOH8Q96SQ7 321 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 ZNF184Q99676 751 aaPredicted RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 C2orf49Q9BVC5 232 aaPredicted RBP12.57□□□□□ -0.4
VPS16-202ENST00000380445 VCX3BQ9H321 246 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 LHX3Q9UBR4 397 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 RNF112Q9ULX5 631 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 FAM50BQ9Y247 325 aa12.57□□□□□ -0.4
VPS16-202ENST00000380445 BPTFQ12830 3046 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 GOLGA8CPA6NN73 597 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 PKMP14618 531 aaKnown RBP12.56□□□□□ -0.4
VPS16-202ENST00000380445 UGT3A1Q6NUS8 523 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 PAQR3Q6TCH7 311 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 Q6ZNB5 142 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 MRPS31Q92665 395 aaKnown RBP12.56□□□□□ -0.4
VPS16-202ENST00000380445 EXT2Q93063 718 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS16-202ENST00000380445 RCN3Q96D15 328 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 DTNBP1Q96EV8 351 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 RC3H2Q9HBD1 1191 aaKnown RBP12.56□□□□□ -0.4
VPS16-202ENST00000380445 MAGEE1Q9HCI5 957 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 MRPL40Q9NQ50 206 aaKnown RBP12.56□□□□□ -0.4
VPS16-202ENST00000380445 UTP6Q9NYH9 597 aaKnown RBP12.56□□□□□ -0.4
VPS16-202ENST00000380445 TMCO1Q9UM00 188 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 CPQQ9Y646 472 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 OAS3Q9Y6K5 1087 aaKnown RBP12.56□□□□□ -0.4
VPS16-202ENST00000380445 ANKRD36A6QL64 1941 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 CLTBP09497 229 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 PTGER3P43115 390 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 ERFP50548 548 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 ADARP55265 1226 aaKnown RBP12.56□□□□□ -0.4
VPS16-202ENST00000380445 KLC1Q07866 573 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 OR4D1Q15615 310 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 PFKFB4Q16877 469 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 ZRANB3Q5FWF4 1079 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 ARMC12Q5T9G4 340 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 FAM217AQ8IXS0 508 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 SH3RF2Q8TEC5 729 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 ACDQ96AP0 544 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 VPS51Q9UID3 782 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 FKBPLQ9UIM3 349 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 OR51B4Q9Y5P0 310 aa12.56□□□□□ -0.4
VPS16-202ENST00000380445 UBXN8O00124 270 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 UBFD1O14562 309 aaKnown RBP12.55□□□□□ -0.4
VPS16-202ENST00000380445 MTHFD2P13995 350 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 CSKP41240 450 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 MAPK8P45983 427 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
VPS16-202ENST00000380445 ATP4BP51164 291 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 DYNC1I2Q13409 638 aaKnown RBP12.55□□□□□ -0.4
VPS16-202ENST00000380445 CCNIQ14094 377 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 GEN1Q17RS7 908 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 TCHHL1Q5QJ38 904 aaPredicted RBP12.55□□□□□ -0.4
VPS16-202ENST00000380445 TXNDC8Q6A555 127 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 RPS27LQ71UM5 84 aaKnown RBP12.55□□□□□ -0.4
VPS16-202ENST00000380445 FBXO39Q8N4B4 442 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 TTC30BQ8N4P2 665 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 MARK4Q96L34 752 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 CDRT15Q96T59 188 aa12.55□□□□□ -0.4
VPS16-202ENST00000380445 GPR21Q99679 349 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms