RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 MAPRE2Q15555 327 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 CLYBLQ8N0X4 340 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 KYQ8NBH2 561 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 MYO19Q96H55 970 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 IL23AQ9NPF7 189 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 ACSS2Q9NR19 701 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 IL17CQ9P0M4 197 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 FKBPLQ9UIM3 349 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 ZNF711Q9Y462 761 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 KRT36O76013 467 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 KCNC1P48547 511 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 ZXDBP98169 803 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 PTPRNQ16849 979 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 TLDC1Q6P9B6 456 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 DEFB107AQ8IZN7 70 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 PELI3Q8N2H9 469 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 EFHBQ8N7U6 833 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 KCNJ9Q92806 393 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 BIRC8Q96P09 236 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 TTC1Q99614 292 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 OSBPL1AQ9BXW6 950 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 CFAP97Q9P2B7 532 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 CDH22Q9UJ99 828 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 PCDHB9Q9Y5E1 797 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 PCDHB1Q9Y5F3 818 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 CEP290O15078 2479 aa23■■□□□ 1.27
VPS16-201ENST00000380443 CXCL14O95715 111 aa23■■□□□ 1.27
VPS16-201ENST00000380443 TXNDC11Q6PKC3 985 aa23■■□□□ 1.27
VPS16-201ENST00000380443 FBXW8Q8N3Y1 598 aa23■■□□□ 1.27
VPS16-201ENST00000380443 PNPLA1Q8N8W4 532 aa23■■□□□ 1.27
VPS16-201ENST00000380443 MAB21L3Q8N8X9 362 aa23■■□□□ 1.27
VPS16-201ENST00000380443 CLP1Q92989 425 aaKnown RBP23■■□□□ 1.27
VPS16-201ENST00000380443 EMILIN2Q9BXX0 1053 aa23■■□□□ 1.27
VPS16-201ENST00000380443 GPR63Q9BZJ6 419 aa23■■□□□ 1.27
VPS16-201ENST00000380443 EFCAB1Q9HAE3 211 aa23■■□□□ 1.27
VPS16-201ENST00000380443 ABCB8Q9NUT2 735 aa23■■□□□ 1.27
VPS16-201ENST00000380443 MED16Q9Y2X0 877 aa23■■□□□ 1.27
VPS16-201ENST00000380443 FCF1Q9Y324 198 aaKnown RBP23■■□□□ 1.27
VPS16-201ENST00000380443 DENND4CQ5VZ89 1909 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 HTRA2O43464 458 aaPredicted RBP22.99■■□□□ 1.27
VPS16-201ENST00000380443 CYBBP04839 570 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 C8AP07357 584 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 DDX6P26196 483 aaKnown RBP eCLIP22.99■■□□□ 1.27
VPS16-201ENST00000380443 ATP4BP51164 291 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 CYP4F8P98187 520 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 BCL2L1Q07817 233 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 TBL3Q12788 808 aaKnown RBP22.99■■□□□ 1.27
VPS16-201ENST00000380443 PEX6Q13608 980 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 SQLEQ14534 574 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 ZRANB3Q5FWF4 1079 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 LYPLAL1Q5VWZ2 237 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 PAQR3Q6TCH7 311 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 ADGRG6Q86SQ4 1221 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 SNX32Q86XE0 403 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 PTGR2Q8N8N7 351 aaPredicted RBP22.99■■□□□ 1.27
VPS16-201ENST00000380443 CLPTM1LQ96KA5 538 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 CATSPER2Q96P56 530 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 PCDH10Q9P2E7 1040 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 TRMT6Q9UJA5 497 aaKnown RBP22.99■■□□□ 1.27
VPS16-201ENST00000380443 IRAK3Q9Y616 596 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 SLC30A1Q9Y6M5 507 aa22.99■■□□□ 1.27
VPS16-201ENST00000380443 SOBPA7XYQ1 873 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 STX16-NPEPL1H3BU86 382 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 STX16O14662 325 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 MTHFD2P13995 350 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 MTTPP55157 894 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 XIAPP98170 497 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 OR4D1Q15615 310 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 SETMARQ53H47 684 aaPredicted RBP22.98■■□□□ 1.27
VPS16-201ENST00000380443 RYBPQ8N488 228 aaPredicted RBP22.98■■□□□ 1.27
VPS16-201ENST00000380443 KREMEN2Q8NCW0 462 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 PPFIBP2Q8ND30 876 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 PIH1D2Q8WWB5 315 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 ZBED2Q9BTP6 218 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 C1QTNF3Q9BXJ4 246 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 ASAH2Q9NR71 780 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 BCAP29Q9UHQ4 241 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 RNF112Q9ULX5 631 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 COPG1Q9Y678 874 aaKnown RBP22.98■■□□□ 1.27
VPS16-201ENST00000380443 TMEM233B4DJY2 109 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 IGSF6O95976 241 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 JUNP05412 331 aaKnown RBP22.98■■□□□ 1.27
VPS16-201ENST00000380443 SPATA31D3P0C874 917 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 CA8P35219 290 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 PTPN5P54829 565 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 SPATA31D4Q6ZUB0 917 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 HS6ST3Q8IZP7 471 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 ZNF557Q8N988 423 aaPredicted RBP22.98■■□□□ 1.27
VPS16-201ENST00000380443 WFDC5Q8TCV5 224 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 PPP1R36Q96LQ0 422 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 GPR21Q99679 349 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 ATP13A3Q9H7F0 1226 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 UTP6Q9NYH9 597 aaKnown RBP22.98■■□□□ 1.27
VPS16-201ENST00000380443 LZTS1Q9Y250 596 aa22.98■■□□□ 1.27
VPS16-201ENST00000380443 KLK8O60259 260 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 TBX10O75333 385 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 GPC4O75487 556 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 PRSS56P0CW18 603 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 GFAPP14136 432 aa22.97■■□□□ 1.27
VPS16-201ENST00000380443 IL2P60568 153 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms