RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 KATNAL2Q8IYT4 538 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 BOLLQ8N9W6 283 aaKnown RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 PNLDC1Q8NA58 520 aaKnown RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 OR10H4Q8NGA5 316 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 SMARCD1Q96GM5 515 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 TMEM176AQ96HP8 235 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 OR52E6Q96RD3 313 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 TRPV4Q9HBA0 871 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 EGFL7Q9UHF1 273 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 LAMP2P13473 410 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 SLCO6A1Q86UG4 719 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 STK40Q8N2I9 435 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 OR6K6Q8NGW6 343 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 TBX5Q99593 518 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 THAP1Q9NVV9 213 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 GRK1Q15835 563 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 TYSND1Q2T9J0 566 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 IDNKQ5T6J7 187 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 KLHL35Q6PF15 583 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 OR5J2Q8NH18 312 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 ETNPPLQ8TBG4 499 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 XAGE5Q8WWM1 108 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 NDRG2Q9UN36 371 aaKnown RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 SHOXO15266 292 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 DDX3YO15523 660 aaKnown RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 SSX4O60224 188 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 CPSF6Q16630 551 aaKnown RBP eCLIP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 UAP1L1Q3KQV9 507 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 ZNF697Q5TEC3 545 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 GET4Q7L5D6 327 aaPredicted RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 SLC47A2Q86VL8 602 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 CREG2Q8IUH2 290 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 MYCBPAPQ8TBZ2 947 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 C12orf66Q96MD2 445 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 TKTL2Q9H0I9 626 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 SEC61A2Q9H9S3 476 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 TMEM165Q9HC07 324 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 PDE2AO00408 941 aaPredicted RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 PRKAR1BP31321 381 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 HNF1BP35680 557 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 WASP42768 502 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 ENTPD1P49961 510 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 NRG1Q02297 640 aaPredicted RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 AMZ1Q400G9 498 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 LDLRAP1Q5SW96 308 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 CHSY3Q70JA7 882 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 SCUBE3Q8IX30 993 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 OR5M3Q8NGP4 307 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 BCAS3Q9H6U6 928 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 RAPGEFL1Q9UHV5 662 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 KCNK1O00180 336 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 IFNA21P01568 189 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 MAP3K8P41279 467 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 ARCN1P48444 511 aaKnown RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 GTF2A2P52657 109 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 LCN1P1Q5VSP4 162 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 VASH1Q7L8A9 365 aaPredicted RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 TMPRSS6Q8IU80 811 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 OR4C6Q8NH72 309 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 AUTS2Q8WXX7 1259 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 DGCR14Q96DF8 476 aaKnown RBP13.25□□□□□ -0.29
HIPK3-202ENST00000379016 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 FZD3Q9NPG1 666 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 GPR108Q9NPR9 543 aa13.25□□□□□ -0.29
HIPK3-202ENST00000379016 VIPP01282 170 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 TKFCQ3LXA3 575 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 PCNX4Q63HM2 1172 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 ZNF101Q8IZC7 436 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SCGB1C1Q8TD33 95 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 GTPBP2Q9BX10 602 aaKnown RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SGK2Q9HBY8 427 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 ZNF70Q9UC06 446 aaPredicted RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 FARSAQ9Y285 508 aaKnown RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SUV39H1O43463 412 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 MAGEA3P43357 314 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SSX2Q16385 188 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 NFE2Q16621 373 aaPredicted RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 LPAR1Q92633 364 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 NINJ1Q92982 152 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SLC7A6OSQ96CW6 309 aaPredicted RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 MXRA8Q9BRK3 442 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 PNO1Q9NRX1 252 aaKnown RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 TOP2BQ02880 1626 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SERPINE1P05121 402 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 DCKP27707 260 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 CCKBRP32239 447 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 CTHP32929 405 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SEC13P55735 322 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SLC26A5P58743 744 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 MLIPQ5VWP3 458 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 TMEM17Q86X19 198 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 CEP76Q8TAP6 659 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 TCP10LQ8TDR4 215 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 FBXO6Q9NRD1 293 aaPredicted RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 CENPMQ9NSP4 180 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 PCDHA3Q9Y5H8 950 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 RPL3P39023 403 aaKnown RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 DUPD1Q68J44 220 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 FRMD7Q6ZUT3 714 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms