RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 UBTFL6P0CB48 400 aaPredicted RBP19.37■□□□□ 0.69
SSU72-204ENST00000378726 CTPS1P17812 591 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 FUT11Q495W5 492 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 C6orf163Q5TEZ5 329 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 IZUMO2Q6UXV1 221 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 SMG7Q92540 1137 aaKnown RBP19.37■□□□□ 0.69
SSU72-204ENST00000378726 UNKQ9C0B0 810 aaKnown RBP19.37■□□□□ 0.69
SSU72-204ENST00000378726 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.37■□□□□ 0.69
SSU72-204ENST00000378726 MID2Q9UJV3 735 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 MYOFQ9NZM1 2061 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.37■□□□□ 0.69
SSU72-204ENST00000378726 SBK3P0C264 359 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 OGNP20774 298 aaKnown RBP19.37■□□□□ 0.69
SSU72-204ENST00000378726 CPOXP36551 454 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 MAGEA10P43363 369 aaPredicted RBP19.37■□□□□ 0.69
SSU72-204ENST00000378726 MAPK8P45983 427 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 TUBB3Q13509 450 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 LRRC8EQ6NSJ5 796 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 TMC5Q6UXY8 1006 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 SPNS2Q8IVW8 549 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 TTC30BQ8N4P2 665 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 PAF1Q8N7H5 531 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 OR2AP1Q8NGE2 309 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 HEXDCQ8WVB3 486 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 MYO19Q96H55 970 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 MAGEE1Q9HCI5 957 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 GPAMQ9HCL2 828 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 OXSMQ9NWU1 459 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 DNAJC16Q9Y2G8 782 aa19.37■□□□□ 0.69
SSU72-204ENST00000378726 A0A088AWK7 358 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 CXorf51AA0A1B0GTR3 108 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 TRIM13O60858 407 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 POU2F2P09086 479 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 GRIA4P48058 902 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 STC1P52823 247 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 CDKN2DP55273 166 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 AP2B1P63010 937 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 USP4Q13107 963 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 CSHL1Q14406 222 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 TBCCQ15814 346 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 AFTPHQ6ULP2 937 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 OR6Y1Q8NGX8 325 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 RDH11Q8TC12 318 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 SREK1Q8WXA9 508 aaKnown RBP19.36■□□□□ 0.69
SSU72-204ENST00000378726 NDE1Q9NXR1 346 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 FKBPLQ9UIM3 349 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 HS3ST2Q9Y278 367 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 HTRA2O43464 458 aaPredicted RBP19.36■□□□□ 0.69
SSU72-204ENST00000378726 ALPIP09923 528 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 PABPC1P11940 636 aaKnown RBP19.36■□□□□ 0.69
SSU72-204ENST00000378726 TCF3P15923 654 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 NRIP1P48552 1158 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 ABCE1P61221 599 aaKnown RBP19.36■□□□□ 0.69
SSU72-204ENST00000378726 SNRPD1P62314 119 aaKnown RBP19.36■□□□□ 0.69
SSU72-204ENST00000378726 SLC25A3Q00325 362 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 ILF2Q12905 390 aaKnown RBP19.36■□□□□ 0.69
SSU72-204ENST00000378726 FAM45BPQ6NSW5 357 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 ZNF549Q6P9A3 640 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 NAT16Q8N8M0 369 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 FAM45AQ8TCE6 357 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 ECSITQ9BQ95 431 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 GPR63Q9BZJ6 419 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 C1orf21Q9H246 121 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 ATP13A3Q9H7F0 1226 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 POLR3BQ9NW08 1133 aaPredicted RBP19.36■□□□□ 0.69
SSU72-204ENST00000378726 ANKRD36A6QL64 1941 aa19.36■□□□□ 0.69
SSU72-204ENST00000378726 HELZP42694 1942 aaKnown RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 TARM1B6A8C7 271 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 BNIP3LO60238 219 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 CCDC166P0CW27 439 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 AOC1P19801 751 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 FAM83EQ2M2I3 478 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 TYSND1Q2T9J0 566 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 ZYG11AQ6WRX3 759 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 ATG14Q6ZNE5 492 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 ZNF557Q8N988 423 aaPredicted RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 OTUB2Q96DC9 234 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 LRRC3BQ96PB8 259 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 IGSF5Q9NSI5 407 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 XPR1Q9UBH6 696 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 HECAQ9UBI9 543 aaPredicted RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 SLCO3A1Q9UIG8 710 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 SLC25A13Q9UJS0 675 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 FNDC3AQ9Y2H6 1198 aaKnown RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 ATP5BP06576 529 aaKnown RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 MC4RP32245 332 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 CDKN1CP49918 316 aaPredicted RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 RPL26P61254 145 aaKnown RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 ECT2LQ008S8 904 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 GSTA3Q16772 222 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 MYLK3Q32MK0 819 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 AGAP9Q5VTM2 703 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 NAPRTQ6XQN6 538 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 CELF5Q8N6W0 485 aaKnown RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 POU5F2Q8N7G0 328 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 PIWIL2Q8TC59 973 aaKnown RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 PPP4R1Q8TF05 950 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 ISG20Q96AZ6 181 aaKnown RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 INTS10Q9NVR2 710 aaKnown RBP19.35■□□□□ 0.69
SSU72-204ENST00000378726 ETAA1Q9NY74 926 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms