RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ATP6AP1Q15904 470 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 MANEALQ5VSG8 457 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 GALNT18Q6P9A2 607 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 AQP12AQ8IXF9 295 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 C2orf69Q8N8R5 385 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 LRCH3Q96II8 777 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 SLC45A3Q96JT2 553 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 ACBD6Q9BR61 282 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 PRKD2Q9BZL6 878 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 PKD2L2Q9NZM6 624 aa16.57■□□□□ 0.24
PCDHA1-201ENST00000378133 UBFD1O14562 309 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 RASAL1O95294 804 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 POMCP01189 267 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 MATN1P21941 496 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 CAPGP40121 348 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 KCNC1P48547 511 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 CCT8P50990 548 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 TNK2Q07912 1038 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 GRSF1Q12849 480 aaKnown RBP eCLIP16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 PLCL1Q15111 1095 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 PSMD5Q16401 504 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 CCL14Q16627 93 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 FAM110CQ1W6H9 321 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 BRMS1LQ5PSV4 323 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 TIGD7Q6NT04 549 aaPredicted RBP16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 KIAA0408Q6ZU52 694 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 OR10T2Q8NGX3 314 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 ROPN1LQ96C74 230 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 CCDC126Q96EE4 140 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 TUBA1CQ9BQE3 449 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 FBRSL1Q9HCM7 1045 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 TBC1D13Q9NVG8 400 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 TRAF6Q9Y4K3 522 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 NYNRINQ9P2P1 1898 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 TTC24A2A3L6 582 aaPredicted RBP16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 E9PAM4 449 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 NME4O00746 187 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 EI24O14681 340 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 ODC1P11926 461 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 HOXC13P31276 330 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 LEPRP48357 1165 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 TMTC4Q5T4D3 741 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 HECTD2Q5U5R9 776 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 SH3RF2Q8TEC5 729 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 PTPN18Q99952 460 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 HEPHQ9BQS7 1158 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 TDRD1Q9BXT4 1180 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 AP5M1Q9H0R1 490 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 ALG9Q9H6U8 611 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 ABCC13Q9NSE7 274 aa16.56■□□□□ 0.24
PCDHA1-201ENST00000378133 ACOX3O15254 700 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 SUPT7LO94864 414 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 RBP1P09455 135 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 ATP6V0D1P61421 351 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 TRIM16LQ309B1 348 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 TMEM207Q6UWW9 146 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 RETREG3Q86VR2 466 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 METTL23Q86XA0 190 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 OR6P1Q8NGX9 317 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 HDAC10Q969S8 669 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 UBXN10Q96LJ8 280 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 SOX17Q9H6I2 414 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 NT5MQ9NPB1 228 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 RIC8BQ9NVN3 520 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 VWA7Q9Y334 891 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 FAM32AQ9Y421 112 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 HS3ST4Q9Y661 456 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 EEF1B2P24534 225 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 RPL9P32969 192 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 SERPINH1P50454 418 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 TMBIM6P55061 237 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 STX1BP61266 288 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 MRPS6P82932 125 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 ACAP2Q15057 778 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 GPR158Q5T848 1215 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 IL31Q6EBC2 164 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 KDELC1Q6UW63 502 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 SPRED1Q7Z699 444 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 FUNDC1Q8IVP5 155 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 DDIASQ8IXT1 998 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 RTL3Q8N8U3 475 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 OR13J1Q8NGT2 312 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 CALML6Q8TD86 181 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 MAGEE2Q8TD90 523 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 FEM1CQ96JP0 617 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 CNDP2Q96KP4 475 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 KLHL5Q96PQ7 755 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 GSTO2Q9H4Y5 243 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 SMPD3Q9NY59 655 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 CPA4Q9UI42 421 aa16.55■□□□□ 0.24
PCDHA1-201ENST00000378133 M0QZ92 97 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 NDUFB5O43674 189 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 C7P10643 843 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 OXTRP30559 389 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CD86P42081 329 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 HLCSP50747 726 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CLCN5P51795 746 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CD300CQ08708 224 aa16.54■□□□□ 0.24
PCDHA1-201ENST00000378133 CYBRD1Q53TN4 286 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms