RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PTGIRP43119 386 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 VPS41P49754 854 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 DR1Q01658 176 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 PPARDQ03181 441 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 CKAP4Q07065 602 aaKnown RBP13.16□□□□□ -0.3
CKAP2-202ENST00000378034 KCNJ11Q14654 390 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 INAVAQ3KP66 663 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 PRAMEF14Q5SWL7 426 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 ARMC3Q5W041 872 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 KLHL7Q8IXQ5 586 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 SPATA4Q8NEY3 305 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 SAP25Q8TEE9 199 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 COX14Q96I36 57 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 VPS35Q96QK1 796 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 AGAP2Q99490 1192 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 LGR4Q9BXB1 951 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 BPIFA1Q9NP55 256 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 IL26Q9NPH9 171 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 KLQ9UEF7 1012 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 APPL1Q9UKG1 709 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 RIMKLBQ9ULI2 386 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 DGKBQ9Y6T7 804 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 ZNF106Q9H2Y7 1883 aaKnown RBP13.16□□□□□ -0.3
CKAP2-202ENST00000378034 HEATR9A2RTY3 570 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 FLRT2O43155 660 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 RASGRP1O95267 797 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 CD59P13987 128 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 JUNDP17535 347 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 TPH1P17752 444 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 PSMA3P25788 255 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 NPY2RP49146 381 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 ZNF140P52738 457 aaPredicted RBP13.16□□□□□ -0.3
CKAP2-202ENST00000378034 SRP54P61011 504 aaKnown RBP13.16□□□□□ -0.3
CKAP2-202ENST00000378034 ITGA9Q13797 1035 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 WHAMMP3Q1A5X7 153 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 RSPO4Q2I0M5 234 aaPredicted RBP13.16□□□□□ -0.3
CKAP2-202ENST00000378034 ALS2CLQ60I27 953 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 LRRC8BQ6P9F7 803 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 NLRP9Q7RTR0 991 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 PCGF5Q86SE9 256 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 MCUQ8NE86 351 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 OR4K2Q8NGD2 314 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 STYXQ8WUJ0 223 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 PEX13Q92968 403 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
CKAP2-202ENST00000378034 SLC13A1Q9BZW2 595 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 CNOT6Q9ULM6 557 aaKnown RBP13.16□□□□□ -0.3
CKAP2-202ENST00000378034 SLC17A4Q9Y2C5 497 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 CSNK1G3Q9Y6M4 447 aa13.16□□□□□ -0.3
CKAP2-202ENST00000378034 GLYATL1P3A0A0U1RQE8 302 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 TMEM202A6NGA9 273 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 MROH6A6NGR9 719 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 FADS2P1A8MWK0 482 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 TM4SF5O14894 197 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 PIAS2O75928 621 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 URI1O94763 535 aaPredicted RBP13.15□□□□□ -0.3
CKAP2-202ENST00000378034 TNFP01375 233 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 MLNP12872 115 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 ADRA1DP25100 572 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 ADCY8P40145 1251 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 GRIA1P42261 906 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 HK3P52790 923 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 POU6F1Q14863 301 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 ALG11Q2TAA5 492 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 PPIL6Q8IXY8 311 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 PHACTR4Q8IZ21 702 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 SDR16C5Q8N3Y7 309 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 KIF18AQ8NI77 898 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 CPT1BQ92523 772 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 ZNF592Q92610 1267 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 SCARF2Q96GP6 870 aaPredicted RBP13.15□□□□□ -0.3
CKAP2-202ENST00000378034 IL22Q9GZX6 179 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 NLE1Q9NVX2 485 aaPredicted RBP13.15□□□□□ -0.3
CKAP2-202ENST00000378034 DLL3Q9NYJ7 618 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 BFARQ9NZS9 450 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 VPS18Q9P253 973 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 SPASTQ9UBP0 616 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 ASIC3Q9UHC3 531 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 LRP4O75096 1905 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 LAMA1P25391 3075 aa13.15□□□□□ -0.3
CKAP2-202ENST00000378034 KNL1Q8NG31 2342 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 NEMP2A6NFY4 417 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 H7C0S8 307 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 BUD23O43709 281 aaKnown RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 CEACAM5P06731 702 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 IVLP07476 585 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 CSRP1P21291 193 aaKnown RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 DGKAP23743 735 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 GRK6P43250 576 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 SEPT6Q14141 434 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 SKIDA1Q1XH10 827 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 ZNF542PQ5EBM4 170 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 KANSL1Q7Z3B3 1105 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 MAATS1Q7Z4T9 603 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 PIP4P1Q86T03 277 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 JAMLQ86YT9 394 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 FSTL5Q8N475 847 aaPredicted RBP13.14□□□□□ -0.31
CKAP2-202ENST00000378034 GLYATL1Q969I3 302 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 KRT12Q99456 494 aa13.14□□□□□ -0.31
CKAP2-202ENST00000378034 RMI1Q9H9A7 625 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms