RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 LOC100506127A0A0U1RQW1 187 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 GNG14A0A1W2PPG7 69 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 PIP5K1BO14986 540 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 ARPC2O15144 300 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 TSPAN1O60635 241 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 MSCO60682 206 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 ULK1O75385 1050 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 STAU1O95793 577 aaKnown RBP8.75□□□□□ -1.01
PCDH9-202ENST00000377865 ANGPTL1O95841 491 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 MYL12AP19105 171 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 YWHAQP27348 245 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 POU1F1P28069 291 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 SLC1A2P43004 574 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 LSM3P62310 102 aaKnown RBP8.75□□□□□ -1.01
PCDH9-202ENST00000377865 HERVK_113P63132 956 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 NIPAL4Q0D2K0 466 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 TYSND1Q2T9J0 566 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 HSDL1Q3SXM5 330 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 PAGE2BQ5JRK9 111 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 TJAP1Q5JTD0 557 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF773Q6PK81 442 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 KBTBD2Q8IY47 623 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 MCOLN3Q8TDD5 553 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 ERVK-6Q9BXR3 956 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 TRPM5Q9NZQ8 1165 aa8.75□□□□□ -1.01
PCDH9-202ENST00000377865 TDRKHQ9Y2W6 561 aaKnown RBP8.75□□□□□ -1.01
PCDH9-202ENST00000377865 GPR25O00155 361 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 SLC7A4O43246 635 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 FADS2O95864 444 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PCNAP12004 261 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 EPB42P16452 691 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 OGNP20774 298 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 GCAP28676 217 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 IKBKEQ14164 716 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 QPRTQ15274 297 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 CTXN3Q4LDR2 81 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 GPR158Q5T848 1215 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 NECAB2Q7Z6G3 386 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 OFCC1Q8IZS5 231 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PPTC7Q8NI37 304 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 AP3S1Q92572 193 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 HSPBAP1Q96EW2 488 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PRICKLE1Q96MT3 831 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 FCRL5Q96RD9 977 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PEBP4Q96S96 227 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 KCNK13Q9HB14 408 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ATP13A1Q9HD20 1204 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 SLC17A6Q9P2U8 582 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PSME2Q9UL46 239 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 TRIM17Q9Y577 477 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PEX16Q9Y5Y5 336 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 NPEPPSL1A6NEC2 478 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 TSPAN19P0C672 248 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ALOX15P16050 662 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PSEN2P49810 448 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 FCHO2Q0JRZ9 810 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 COX10Q12887 443 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 IL18R1Q13478 541 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 SKIV2LQ15477 1246 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PHKG1Q16816 387 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF621Q6ZSS3 439 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 SLC44A2Q8IWA5 706 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 STYXQ8WUJ0 223 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 C17orf50Q8WW18 174 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 LINGO1Q96FE5 620 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 OR52E6Q96RD3 313 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ADAMTS10Q9H324 1103 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 TFB2MQ9H5Q4 396 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 USP29Q9HBJ7 922 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 GSTK1Q9Y2Q3 226 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 SAMHD1Q9Y3Z3 626 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 CBX4O00257 560 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 EI24O14681 340 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 DNAJB5O75953 348 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 NPPAP01160 153 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 MAGEA8P43361 318 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 GSTM5P46439 218 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ELP6Q0PNE2 266 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 KBTBD6Q86V97 674 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 COLGALT2Q8IYK4 626 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 LGI2Q8N0V4 545 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ANKFN1Q8N957 763 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 UBASH3BQ8TF42 649 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 OTULINQ96BN8 352 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 NFKBIZQ9BYH8 718 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 MOCS1Q9NZB8 636 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 LMCD1Q9NZU5 365 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 SH3BP1Q9Y3L3 701 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PTPRJQ12913 1337 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 E7ENX8 843 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 H0YAE9 185 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 CLDN5O00501 218 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PRMT5O14744 637 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 AMHP03971 560 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 RPL3P39023 403 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 CDH13P55290 713 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 RAB25P57735 213 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 INCA1Q0VD86 236 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 DDX39BQ13838 428 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF544Q6NX49 715 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms