RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 DSC2Q02487 901 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 KCNC4Q03721 635 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 GALNT2Q10471 571 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 PAFAH1B3Q15102 231 aaKnown RBP17.34■□□□□ 0.37
HLA-A-201ENST00000376802 ATP13A4Q4VNC1 1196 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 NCBP2-AS2Q69YL0 99 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 MARK2Q7KZI7 788 aaKnown RBP17.34■□□□□ 0.37
HLA-A-201ENST00000376802 PRICKLE2Q7Z3G6 844 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 CPNE8Q86YQ8 564 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 ZSCAN1Q8NBB4 408 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 AGBL5Q8NDL9 886 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 WDR24Q96S15 920 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 ARHGAP9Q9BRR9 750 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 RIOK2Q9BVS4 552 aaKnown RBP17.34■□□□□ 0.37
HLA-A-201ENST00000376802 NUP85Q9BW27 656 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 SLC12A9Q9BXP2 914 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 POLR1EQ9GZS1 481 aaKnown RBP17.34■□□□□ 0.37
HLA-A-201ENST00000376802 KCNK4Q9NYG8 393 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 PDP2Q9P2J9 529 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 IP6K2Q9UHH9 426 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 ANAPC7Q9UJX3 599 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 B3GALT1Q9Y5Z6 326 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 MAST4O15021 2626 aa17.34■□□□□ 0.37
HLA-A-201ENST00000376802 TRBV23OR9-2A0A075B6M9 112 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 A0A087X0T9 212 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 MATN3O15232 486 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 DNAJC6O75061 913 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 FAM228BP0C875 321 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 ZNF30P17039 623 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 UGT1A3P35503 534 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 PBX1P40424 430 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 FASLGP48023 281 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 ITKQ08881 620 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 NIPAL4Q0D2K0 466 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 BIRC2Q13490 618 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 PEX6Q13608 980 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 DPYSL3Q14195 570 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 KRT81Q14533 505 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 CLCA4Q14CN2 919 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 TMEM71Q6P5X7 295 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 ZNF761Q86XN6 746 aaPredicted RBP17.33■□□□□ 0.36
HLA-A-201ENST00000376802 SFRP1Q8N474 314 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.33■□□□□ 0.36
HLA-A-201ENST00000376802 EXD1Q8NHP7 514 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 ARRDC2Q8TBH0 407 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 SLC37A2Q8TED4 501 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 SYN2Q92777 582 aaPredicted RBP17.33■□□□□ 0.36
HLA-A-201ENST00000376802 ART4Q93070 314 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 FATE1Q969F0 183 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 TDRD1Q9BXT4 1180 aaKnown RBP17.33■□□□□ 0.36
HLA-A-201ENST00000376802 FAM117AQ9C073 453 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 OCIAD1Q9NX40 245 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 CNOT6Q9ULM6 557 aaKnown RBP17.33■□□□□ 0.36
HLA-A-201ENST00000376802 CHKBQ9Y259 395 aa17.33■□□□□ 0.36
HLA-A-201ENST00000376802 BZW2Q9Y6E2 419 aaKnown RBP17.33■□□□□ 0.36
HLA-A-201ENST00000376802 A0A1W2PQJ5 194 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 CYSRT1A8MQ03 144 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 INPP4BO15327 924 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 MAP3K6O95382 1288 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 CLDN7O95471 211 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 ATP1A1P05023 1023 aaKnown RBP17.32■□□□□ 0.36
HLA-A-201ENST00000376802 GPLD1P80108 840 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 LRP8Q14114 963 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 TDRD12Q587J7 1177 aaKnown RBP17.32■□□□□ 0.36
HLA-A-201ENST00000376802 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.32■□□□□ 0.36
HLA-A-201ENST00000376802 NRSN1Q8IZ57 195 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 NDUFAF2Q8N183 169 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 BMPERQ8N8U9 685 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 LRRN4Q8WUT4 740 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 COL26A1Q96A83 441 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 TSGA13Q96PP4 275 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 DPYSL5Q9BPU6 564 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 DDA1Q9BW61 102 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 SPRY4Q9C004 299 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 RBM22Q9NW64 420 aaKnown RBP eCLIP17.32■□□□□ 0.365e-6■■■■■ 31.7
HLA-A-201ENST00000376802 PRKAB1Q9Y478 270 aa17.32■□□□□ 0.36
HLA-A-201ENST00000376802 OAS3Q9Y6K5 1087 aaKnown RBP17.32■□□□□ 0.36
HLA-A-201ENST00000376802 MYO1FO00160 1098 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 TERTO14746 1132 aaKnown RBP17.31■□□□□ 0.36
HLA-A-201ENST00000376802 SUV39H1O43463 412 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 CES1P23141 567 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 CCNCP24863 283 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 CSRP3P50461 194 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 ANKRD20A8PQ5CZ79 823 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 CCDC122Q5T0U0 273 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 GALNT13Q8IUC8 556 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 LYSMD1Q96S90 227 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 IL17BQ9UHF5 180 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 AMACRQ9UHK6 382 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 HEMK1Q9Y5R4 338 aaPredicted RBP17.31■□□□□ 0.36
HLA-A-201ENST00000376802 FLNCQ14315 2725 aa17.31■□□□□ 0.36
HLA-A-201ENST00000376802 COL12A1Q99715 3063 aa17.3■□□□□ 0.36
HLA-A-201ENST00000376802 B4E171 279 aa17.3■□□□□ 0.36
HLA-A-201ENST00000376802 SERPINC1P01008 464 aa17.3■□□□□ 0.36
HLA-A-201ENST00000376802 SERPING1P05155 500 aa17.3■□□□□ 0.36
HLA-A-201ENST00000376802 HLA-DQB2P05538 268 aa17.3■□□□□ 0.36
HLA-A-201ENST00000376802 PYGLP06737 847 aa17.3■□□□□ 0.36
HLA-A-201ENST00000376802 SFTPCP11686 197 aa17.3■□□□□ 0.36
HLA-A-201ENST00000376802 LIFP15018 202 aa17.3■□□□□ 0.36
HLA-A-201ENST00000376802 CSTF2P33240 577 aaKnown RBP eCLIP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms