RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CPQQ9Y646 472 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 KERAO60938 352 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 PYGLP06737 847 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 MTHFD2P13995 350 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 CSKP41240 450 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 SQLEQ14534 574 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 PTPRRQ15256 657 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 PABPC1LQ4VXU2 614 aaKnown RBP20.14■□□□□ 0.81
VSX1-202ENST00000376709 GK5Q6ZS86 529 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 DHDDSQ86SQ9 333 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 KIAA1191Q96A73 305 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 C19orf60Q96EN9 201 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 NPAS2Q99743 824 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 GEMIN8Q9NWZ8 242 aaKnown RBP20.14■□□□□ 0.81
VSX1-202ENST00000376709 VPS51Q9UID3 782 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 LCHNA4D1U4 455 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 MT-CO1P00395 513 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 HSPA1AP0DMV8 641 aaKnown RBP20.13■□□□□ 0.81
VSX1-202ENST00000376709 HSPA1BP0DMV9 641 aaKnown RBP20.13■□□□□ 0.81
VSX1-202ENST00000376709 PSMA3P25788 255 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 SH3BP2P78314 561 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 ATXN7L2Q5T6C5 722 aaPredicted RBP20.13■□□□□ 0.81
VSX1-202ENST00000376709 CLYBLQ8N0X4 340 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 ADAMTS19Q8TE59 1207 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 YME1L1Q96TA2 773 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 MRPL1Q9BYD6 325 aaKnown RBP20.13■□□□□ 0.81
VSX1-202ENST00000376709 MID1IP1Q9NPA3 183 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 WBP1LQ9NX94 342 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 HACD3Q9P035 362 aa20.13■□□□□ 0.81
VSX1-202ENST00000376709 A0A0U1RQS6 177 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 ATP6AP2A0A1C7CYW4 349 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 VPS26AO75436 327 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 ATP6AP2O75787 350 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 ATP6V0D1P61421 351 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 ZXDBP98169 803 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 FASTKQ14296 549 aaKnown RBP20.12■□□□□ 0.81
VSX1-202ENST00000376709 SETMARQ53H47 684 aaPredicted RBP20.12■□□□□ 0.81
VSX1-202ENST00000376709 ADGRG6Q86SQ4 1221 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 MFN1Q8IWA4 741 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 MICAL1Q8TDZ2 1067 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 BIRC8Q96P09 236 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 OBSL1O75147 1896 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 LRRC14BA6NHZ5 514 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 PSMD12O00232 456 aaPredicted RBP20.12■□□□□ 0.81
VSX1-202ENST00000376709 TEX28O15482 410 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 OR1I1O60431 355 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 SMNDC1O75940 238 aaKnown RBP eCLIP20.12■□□□□ 0.81
VSX1-202ENST00000376709 PKMP14618 531 aaKnown RBP20.12■□□□□ 0.81
VSX1-202ENST00000376709 RAG1P15918 1043 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 GJA8P48165 433 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 THOP1P52888 689 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 PKNOX1P55347 436 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 MAPRE2Q15555 327 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 MMEL1Q495T6 779 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 AARS2Q5JTZ9 985 aaKnown RBP20.12■□□□□ 0.81
VSX1-202ENST00000376709 FAM219BQ5XKK7 198 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 IZUMO2Q6UXV1 221 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 OTOP2Q7RTS6 562 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 FBXO39Q8N4B4 442 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 NKAPQ8N5F7 415 aaKnown RBP20.12■□□□□ 0.81
VSX1-202ENST00000376709 WFDC5Q8TCV5 224 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 USP13Q92995 863 aaPredicted RBP20.12■□□□□ 0.81
VSX1-202ENST00000376709 MIEF2Q96C03 454 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 TM6SF2Q9BZW4 377 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 CCDC167Q9P0B6 97 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 PKP3Q9Y446 797 aa20.12■□□□□ 0.81
VSX1-202ENST00000376709 OAS3Q9Y6K5 1087 aaKnown RBP20.12■□□□□ 0.81
VSX1-202ENST00000376709 LIN7AO14910 233 aaPredicted RBP20.11■□□□□ 0.81
VSX1-202ENST00000376709 GREM1O60565 184 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 CDK14O94921 469 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 CKMP06732 381 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 TSNQ15631 228 aaKnown RBP20.11■□□□□ 0.81
VSX1-202ENST00000376709 AGKQ53H12 422 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 PIGGQ5H8A4 983 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 TAS2R42Q7RTR8 314 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 TTC30BQ8N4P2 665 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 DCAF4L2Q8NA75 395 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 DDI1Q8WTU0 396 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 GPR63Q9BZJ6 419 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 IL21Q9HBE4 155 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 TRMT6Q9UJA5 497 aaKnown RBP20.11■□□□□ 0.81
VSX1-202ENST00000376709 LSM7Q9UK45 103 aaKnown RBP20.11■□□□□ 0.81
VSX1-202ENST00000376709 OR51B4Q9Y5P0 310 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 SYCE1LA8MT33 242 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 BTN3A1O00481 513 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 PPP6CO00743 305 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 CLASP2O75122 1294 aaKnown RBP20.11■□□□□ 0.81
VSX1-202ENST00000376709 NIPSNAP2O75323 286 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 STX5Q13190 355 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 FLOT2Q14254 428 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 Q6ZNB5 142 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 KBTBD6Q86V97 674 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 PAF1Q8N7H5 531 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 TRPC4APQ8TEL6 797 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 NSUN5Q96P11 429 aaKnown RBP20.11■□□□□ 0.81
VSX1-202ENST00000376709 C2orf49Q9BVC5 232 aaPredicted RBP20.11■□□□□ 0.81
VSX1-202ENST00000376709 GALPQ9UBC7 116 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 DNAJC15Q9Y5T4 150 aa20.11■□□□□ 0.81
VSX1-202ENST00000376709 NPEPPSL1A6NEC2 478 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 E5RI56 91 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms