RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 RPL5P46777 297 aaKnown RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 CEP68Q76N32 757 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 FAM83AQ86UY5 434 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 MCFD2Q8NI22 146 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 CKAP2Q8WWK9 683 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 TRPS1Q9UHF7 1281 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 DDX3YO15523 660 aaKnown RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 FGBP02675 491 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ASGR1P07306 291 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ZNF806P0C7X5 589 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ABCG1P45844 678 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 CDKL1Q00532 357 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ALLCQ8N6M5 410 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 BAP1Q92560 729 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 AARSD1Q9BTE6 412 aaKnown RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 MTRRQ9UBK8 725 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 H3BQF6 201 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 CBX3Q13185 183 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 RNASE12Q5GAN4 147 aaKnown RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ATXN7L2Q5T6C5 722 aaPredicted RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 PLET1Q6UQ28 207 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 CRTC3Q6UUV7 619 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 LRRC69Q6ZNQ3 347 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 RANBP3LQ86VV4 465 aaPredicted RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ZNF548Q8NEK5 533 aaPredicted RBP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 OR52K2Q8NGK3 314 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 METTL21AQ8WXB1 218 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 SPATA31A6Q5VVP1 1343 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 NPEPPSL1A6NEC2 478 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 DDX6P26196 483 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS13A-204ENST00000376634 ADAM8P78325 824 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 BEND5Q7L4P6 421 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 TMEM192Q8IY95 271 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 GAD1Q99259 594 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 SEMA3CQ99985 751 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 TM6SF2Q9BZW4 377 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 SLC6A15Q9H2J7 730 aa12.44□□□□□ -0.42
VPS13A-204ENST00000376634 METTL21EPA6NDL7 271 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 TP73O15350 636 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 AP5Z1O43299 807 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 SERPINA3P01011 423 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ATP6V0D1P61421 351 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 FOLH1Q04609 750 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 SF1Q15637 639 aaKnown RBP12.43□□□□□ -0.42
VPS13A-204ENST00000376634 RAB11FIP2Q7L804 512 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 MAGEL2Q9UJ55 1249 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 HSD3B2P26439 372 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ZBTB6Q15916 424 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 CCNYL2Q5T2Q4 361 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 INO80EQ8NBZ0 244 aaPredicted RBP12.43□□□□□ -0.42
VPS13A-204ENST00000376634 MTMR8Q96EF0 704 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 C1GALT1C1Q96EU7 318 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 AIF1LQ9BQI0 150 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 FAM86B1E9PN63 330 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 DBIP07108 87 aaKnown RBP12.43□□□□□ -0.42
VPS13A-204ENST00000376634 CCR3P51677 355 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 DLG4P78352 724 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 PRR5P85299 388 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 RASGEF1BQ0VAM2 473 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 SLC34A3Q8N130 599 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ZNF558Q96NG5 402 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ADAM2Q99965 735 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 SCN3AQ9NY46 2000 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 TBX2Q13207 712 aaPredicted RBP12.43□□□□□ -0.42
VPS13A-204ENST00000376634 PTPRNQ16849 979 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ZDHHC20Q5W0Z9 365 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 SPAG16Q8N0X2 631 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 TRNAU1APQ9NX07 287 aaKnown RBP12.43□□□□□ -0.42
VPS13A-204ENST00000376634 HCN3Q9P1Z3 774 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ASF1AQ9Y294 204 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 A0A075B6Q4 140 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ANXA2P2A6NMY6 339 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ANXA2P07355 339 aaKnown RBP12.43□□□□□ -0.42
VPS13A-204ENST00000376634 HDCP19113 662 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 OR4L1Q8NH43 312 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 TMPRSS4Q9NRS4 437 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ADGRE2Q9UHX3 823 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 BBIP1A8MTZ0 92 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 PEX11AO75192 247 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 FGF19O95750 216 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ACAP2Q15057 778 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 CAPN13Q6MZZ7 669 aaPredicted RBP12.43□□□□□ -0.42
VPS13A-204ENST00000376634 C16orf46Q6P387 395 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 TBC1D21Q8IYX1 336 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ARHGAP20Q9P2F6 1191 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 SPATA31A1Q5TZJ5 1347 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 PSMD9O00233 223 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 TRIM38O00635 465 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 JSRP1Q96MG2 331 aaPredicted RBP12.43□□□□□ -0.42
VPS13A-204ENST00000376634 C5orf34Q96MH7 638 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 ZNF670Q9BS34 389 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 COMMD4Q9H0A8 199 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 DNAJC18Q9H819 358 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 RGS17Q9UGC6 210 aaPredicted RBP12.43□□□□□ -0.42
VPS13A-204ENST00000376634 PCYOX1Q9UHG3 505 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 IKZF2Q9UKS7 526 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 FAM186AA6NE01 2351 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 FAM240BA0A1B0GVZ2 78 aa12.43□□□□□ -0.42
VPS13A-204ENST00000376634 AZIN1O14977 448 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms