RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 TTC1Q99614 292 aa22.82■■□□□ 1.24
HLA-C-202ENST00000376237 SLC17A9Q9BYT1 436 aa22.82■■□□□ 1.24
HLA-C-202ENST00000376237 ASB8Q9H765 288 aa22.82■■□□□ 1.24
HLA-C-202ENST00000376237 VIPAS39Q9H9C1 493 aa22.82■■□□□ 1.24
HLA-C-202ENST00000376237 IARS2Q9NSE4 1012 aaKnown RBP22.82■■□□□ 1.24
HLA-C-202ENST00000376237 CD84Q9UIB8 345 aa22.82■■□□□ 1.24
HLA-C-202ENST00000376237 PLAAQ9Y263 795 aa22.82■■□□□ 1.24
HLA-C-202ENST00000376237 FNDC3AQ9Y2H6 1198 aaKnown RBP22.82■■□□□ 1.24
HLA-C-202ENST00000376237 COQ6Q9Y2Z9 468 aa22.82■■□□□ 1.24
HLA-C-202ENST00000376237 A0A0C4DFX4 3053 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 PRR23AA6NEV1 266 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 AGAP14A8MT82 685 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 GOLGA8KD6RF30 607 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 GOLGA8TH3BQL2 631 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 GAPDHSO14556 408 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-202ENST00000376237 PFDN6O15212 129 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 TCEA3O75764 348 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 PPARGP37231 505 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-202ENST00000376237 NFATC2Q13469 925 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 ZRANB3Q5FWF4 1079 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 LRIG3Q6UXM1 1119 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 CERS6Q6ZMG9 384 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 MARK2Q7KZI7 788 aaKnown RBP22.81■■□□□ 1.24
HLA-C-202ENST00000376237 SLC26A11Q86WA9 606 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 SCAMP4Q969E2 229 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 SPACA7Q96KW9 195 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 SPATA16Q9BXB7 569 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 ROPN1BQ9BZX4 212 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-202ENST00000376237 PCED1AQ9H1Q7 454 aa22.81■■□□□ 1.24
HLA-C-202ENST00000376237 ROPN1Q9HAT0 212 aaPredicted RBP22.81■■□□□ 1.24
HLA-C-202ENST00000376237 OR51F1A6NGY5 319 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 GOLGA8CPA6NN73 597 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 C10orf142B7Z368 130 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 OGNP20774 298 aaKnown RBP22.8■■□□□ 1.24
HLA-C-202ENST00000376237 CCR5P51681 352 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 ILF2Q12905 390 aaKnown RBP22.8■■□□□ 1.24
HLA-C-202ENST00000376237 CHRNA6Q15825 494 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 SETMARQ53H47 684 aaPredicted RBP22.8■■□□□ 1.24
HLA-C-202ENST00000376237 LYPLAL1Q5VWZ2 237 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 ZNF470Q6ECI4 717 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 GALNT7Q86SF2 657 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 CROCCP2Q86T23 111 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 CILP2Q8IUL8 1156 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 OTUD6BQ8N6M0 293 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 PPM1NQ8N819 430 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 DTWD2Q8NBA8 298 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 ULK4Q96C45 1275 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 RIOK2Q9BVS4 552 aaKnown RBP22.8■■□□□ 1.24
HLA-C-202ENST00000376237 SMYD2Q9NRG4 433 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 TXNDC16Q9P2K2 825 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 SLC24A2Q9UI40 661 aa22.8■■□□□ 1.24
HLA-C-202ENST00000376237 TNFRSF10AO00220 468 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 PAK4O96013 591 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-202ENST00000376237 SHBGP04278 402 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 NUDT1P36639 197 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 TTPAP49638 278 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 TMEM31Q5JXX7 168 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 SLC36A4Q6YBV0 504 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 C2CD4AQ8NCU7 369 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-202ENST00000376237 RLN3Q8WXF3 142 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 LENG8Q96PV6 779 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-202ENST00000376237 AGAP2Q99490 1192 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 CPNE1Q99829 537 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 TMEM109Q9BVC6 243 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 SMOXQ9NWM0 555 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 FBXO5Q9UKT4 447 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 FBXO4Q9UKT5 387 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 VPS9D1Q9Y2B5 631 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 NFS1Q9Y697 457 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 IKBKGQ9Y6K9 419 aa22.79■■□□□ 1.24
HLA-C-202ENST00000376237 TRBV5-4A0A0C4DH59 114 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 CXorf49A8MYA2 514 aaPredicted RBP22.78■■□□□ 1.24
HLA-C-202ENST00000376237 LATO43561 262 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 NDUFS2O75306 463 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 PMLP29590 882 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 MSH2P43246 934 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 LRRC14Q15048 493 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 TYSND1Q2T9J0 566 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 RNF187Q5TA31 235 aaPredicted RBP22.78■■□□□ 1.24
HLA-C-202ENST00000376237 KIAA0895LQ68EN5 471 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 CADM4Q8NFZ8 388 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 SLC44A1Q8WWI5 657 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 PKNOX2Q96KN3 472 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 ZIM3Q96PE6 472 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 VPS35Q96QK1 796 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 GPR174Q9BXC1 333 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 EPHX3Q9H6B9 360 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 TTC28Q96AY4 2481 aa22.78■■□□□ 1.24
HLA-C-202ENST00000376237 POC1B-GALNT4F8VUJ3 575 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 ATP8B1O43520 1251 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 INHBAP08476 426 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 TEAD1P28347 426 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 PPP2CBP62714 309 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 PPP2CAP67775 309 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 RASA2Q15283 850 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 ATP13A5Q4VNC0 1218 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 TAS2R42Q7RTR8 314 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 WDR5BQ86VZ2 330 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 TDRPQ86YL5 185 aa22.77■■□□□ 1.24
HLA-C-202ENST00000376237 DENND6AQ8IWF6 608 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms