RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PRR23D2P0DMB1 279 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CASP9P55211 416 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ABRQ12979 859 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CDCA2Q69YH5 1023 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 IQSEC1Q6DN90 963 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CLEC20AQ6ZU45 233 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 RNF180Q86T96 592 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 MCOLN3Q8TDD5 553 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 MAML3Q96JK9 1138 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ADI1Q9BV57 179 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 FTHL17Q9BXU8 183 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 MIEF1Q9NQG6 463 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 KCNH4Q9UQ05 1017 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 TBC1D30Q9Y2I9 924 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ZBTB14O43829 449 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 DGKAP23743 735 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 KPNA1P52294 538 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CRYBB1P53674 252 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CLCQ05315 142 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ENPEPQ07075 957 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SLC10A2Q12908 348 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 GTF2H2Q13888 395 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 MAPKAPK3Q16644 382 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 TMEM214Q6NUQ4 689 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 GTF2H2CQ6P1K8 395 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 DCLRE1AQ6PJP8 1040 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 HIPK1Q86Z02 1210 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 RAB42Q8N4Z0 105 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 NKAPQ8N5F7 415 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 YIPF2Q9BWQ6 316 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ZC4H2Q9NQZ6 224 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SMPD3Q9NY59 655 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 PTTG2Q9NZH5 202 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 MAP10Q9P2G4 905 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 AGO1Q9UL18 857 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 LOXHD1Q8IVV2 1947 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 MYCLP1P12525 358 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 AOC1P19801 751 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 WARSP23381 471 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ATN1P54259 1190 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 DQX1Q8TE96 717 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 BORCS5Q969J3 196 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CDK5RAP1Q96SZ6 601 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 PCYT2Q99447 389 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CNGB3Q9NQW8 809 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 RCOR3Q9P2K3 495 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 DNMT3LQ9UJW3 386 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 GOLGA4Q13439 2230 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 H0Y858 1186 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 hCG_2039718K7EN88 272 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 NPHS1O60500 1241 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 TKTP29401 623 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 TOP3AQ13472 1001 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ACAP2Q15057 778 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 GLYATQ6IB77 296 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CYP4Z1Q86W10 505 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 C19orf18Q8NEA5 215 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 OR9I1Q8NGQ6 314 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 FAR1Q8WVX9 515 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 EPS8L2Q9H6S3 715 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 RRAGCQ9HB90 399 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CD84Q9UIB8 345 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 DARSP14868 501 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 HDCP19113 662 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 RPS9P46781 194 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 GPR15P49685 360 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 EPHB3P54753 998 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 BCL2L1Q07817 233 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 HSPA14Q0VDF9 509 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SPATA19Q7Z5L4 167 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 RELL1Q8IUW5 271 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ELMO1Q92556 727 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 TSEN34Q9BSV6 310 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SYT11Q9BT88 431 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 KLHL3Q9UH77 587 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 IQCF5A8MTL0 148 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SLC28A1O00337 649 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ARPC2O15144 300 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SPATA31D3P0C874 917 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 GPC1P35052 558 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 TTPAP49638 278 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SEMG2Q02383 582 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 PDZK1Q5T2W1 519 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 CASP12Q6UXS9 341 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SPATA31D4Q6ZUB0 917 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 PSMG2Q969U7 264 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 NACC2Q96BF6 587 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 NDEL1Q9GZM8 345 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 RNF39Q9H2S5 420 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 PDP1Q9P0J1 537 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 IGSF9Q9P2J2 1179 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SAMHD1Q9Y3Z3 626 aaKnown RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 ZFP37Q9Y6Q3 630 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 FAM72CH0Y354 149 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 OR56A5P0C7T3 313 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 POLD2P49005 469 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 TLR1Q15399 786 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 FAM187BQ17R55 369 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 XKR6Q5GH73 641 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms