RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 NCCRP1Q6ZVX7 275 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 DNAJB14Q8TBM8 379 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 PTGFRNQ9P2B2 879 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 GLS2Q9UI32 602 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 MYH15Q9Y2K3 1946 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 NOL4O94818 638 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 FAM91A1Q658Y4 838 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 ZNF773Q6PK81 442 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 RINLQ6ZS11 566 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 LHFPL3Q86UP9 236 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 SLC45A3Q96JT2 553 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 NFKBIZQ9BYH8 718 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 TTYH1Q9H313 450 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 ZIM2Q9NZV7 527 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 FAM234BA2RU67 622 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 B3GAT3O94766 335 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 GNG2P59768 71 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 USP7Q93009 1102 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 MARK4Q96L34 752 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 ADGRE2Q9UHX3 823 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 BCAS2O75934 225 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 IST1P53990 364 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CACNB3P54284 484 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 SLC9A4Q6AI14 798 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 ANO7Q6IWH7 933 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CHPFQ8IZ52 775 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 RNASE11Q8TAA1 199 aaKnown RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 HDAC2Q92769 488 aaKnown RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CAMK1GQ96NX5 476 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 SDCBP2Q9H190 292 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 EBF3Q9H4W6 596 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 NR2E1Q9Y466 385 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CCNDBP1O95273 360 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 MYH7P12883 1935 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 GLDCP23378 1020 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 C11orf65Q8NCR3 313 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 DIRAS2Q96HU8 199 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 PITPNM1O00562 1244 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 PSMB4P28070 264 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 GMPSP49915 693 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 PLK1P53350 603 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 FUT2Q10981 343 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 LAPTM4BQ86VI4 370 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 FBXO30Q8TB52 745 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 SEMA4BQ9NPR2 832 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 ATF5Q9Y2D1 282 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 GABRDO14764 452 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 PTTG1O95997 202 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 ETS2P15036 469 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CYP3A5P20815 502 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 IL18Q14116 193 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 AMIGO2Q86SJ2 522 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 STX12Q86Y82 276 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 BEND7Q8N7W2 519 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 PCSK9Q8NBP7 692 aaKnown RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 REPS2Q8NFH8 660 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CPT1BQ92523 772 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 MRPS31Q92665 395 aaKnown RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 AGAP2Q99490 1192 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 MEMO1Q9Y316 297 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 E7ENX8 843 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 PDPK1O15530 556 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 SNHG28P0DPA3 235 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 LPOP22079 712 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CRATP43155 626 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 ATP12AP54707 1039 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 SRSF11Q05519 484 aaKnown RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CHST15Q7LFX5 561 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-204ENST00000375290 C11orf74Q86VG3 221 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 RNF148Q8N7C7 305 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 OR4L1Q8NH43 312 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 CRISPLD1Q9H336 500 aa10.16□□□□□ -0.78
PTCH1-204ENST00000375290 PRLP01236 227 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 ARP10275 920 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 GCNT7Q6ZNI0 430 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 SPATA9Q9BWV2 254 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 GSDMCQ9BYG8 508 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 TRIM2Q9C040 744 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 TPD52L2O43399 206 aaKnown RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 STAU1O95793 577 aaKnown RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 GNRH1P01148 92 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 C2P06681 752 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 DBTP11182 482 aaKnown RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 ALDH4A1P30038 563 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 ALDH7A1P49419 539 aaKnown RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 USP4Q13107 963 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 CAMKK1Q8N5S9 505 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 DNAJB3Q8WWF6 145 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 FNDC11Q9BVV2 318 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 OXSMQ9NWU1 459 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 ZNF282Q9UDV7 671 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 STUB1Q9UNE7 303 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 PRRG1O14668 218 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 FGBP02675 491 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 TUBP50607 506 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 BCL2L1Q07817 233 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 SYT16Q17RD7 645 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 ATPIF1Q9UII2 106 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 PCDHB5Q9Y5E4 795 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 MRC1P22897 1456 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms