RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 PTERQ96BW5 349 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 KLHL32Q96NJ5 620 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 UHRF1Q96T88 793 aaPredicted RBP13.9□□□□□ -0.18
HMGCL-203ENST00000374490 HOPXQ9BPY8 73 aaPredicted RBP13.9□□□□□ -0.18
HMGCL-203ENST00000374490 DERL2Q9GZP9 239 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 CCDC68Q9H2F9 335 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 PFDN4Q9NQP4 134 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 NLE1Q9NVX2 485 aaPredicted RBP13.9□□□□□ -0.18
HMGCL-203ENST00000374490 CD300AQ9UGN4 299 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 PADI4Q9UM07 663 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 ARIH1Q9Y4X5 557 aaPredicted RBP13.9□□□□□ -0.18
HMGCL-203ENST00000374490 TTC3P53804 2025 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 TET1Q8NFU7 2136 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 MICAL3Q7RTP6 2002 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 SYCE1LA8MT33 242 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 UBFD1O14562 309 aaKnown RBP13.9□□□□□ -0.19
HMGCL-203ENST00000374490 AZIN1O14977 448 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 KERAO60938 352 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 ACRP10323 421 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 FGFR3P22607 806 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 ACVRL1P37023 503 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 RPL5P46777 297 aaKnown RBP13.9□□□□□ -0.19
HMGCL-203ENST00000374490 MRPL19P49406 292 aaKnown RBP13.9□□□□□ -0.19
HMGCL-203ENST00000374490 POLE2P56282 527 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 RAD51Q06609 339 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 GPR17Q13304 367 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 IHHQ14623 411 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 PPP1R3AQ16821 1122 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 CNPY1Q3B7I2 92 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 ZNF549Q6P9A3 640 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 C16orf59Q7L2K0 433 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 LILRA2Q8N149 483 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 MIER2Q8N344 545 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 RNF148Q8N7C7 305 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 STAG3L4Q8TBR4 150 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 DDI1Q8WTU0 396 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 TSPEARQ8WU66 669 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 KIAA1191Q96A73 305 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 CASD1Q96PB1 797 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 CINPQ9BW66 212 aaPredicted RBP13.9□□□□□ -0.19
HMGCL-203ENST00000374490 NUSAP1Q9BXS6 441 aaKnown RBP13.9□□□□□ -0.19
HMGCL-203ENST00000374490 PBX4Q9BYU1 374 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 TNFRSF12AQ9NP84 129 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 CCDC167Q9P0B6 97 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 KCTD3Q9Y597 815 aa13.9□□□□□ -0.19
HMGCL-203ENST00000374490 UNC80Q8N2C7 3258 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 MTMR11A4FU01 709 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 OR51F1A6NGY5 319 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 RHOBTB1O94844 696 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 MATN4O95460 622 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 PYGLP06737 847 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 HMBSP08397 361 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 FAM58BPP0C7Q3 252 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 LBPP18428 481 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 GPX3P22352 226 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 GSTT1P30711 240 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 ZNF140P52738 457 aaPredicted RBP13.89□□□□□ -0.19
HMGCL-203ENST00000374490 TAF1AQ15573 450 aaPredicted RBP13.89□□□□□ -0.19
HMGCL-203ENST00000374490 RAB30Q15771 203 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 UGT3A2Q3SY77 523 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 PABPC1LQ4VXU2 614 aaKnown RBP13.89□□□□□ -0.19
HMGCL-203ENST00000374490 TJAP1Q5JTD0 557 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 FAM171A1Q5VUB5 890 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 NADSYN1Q6IA69 706 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 TXNDC11Q6PKC3 985 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 LDB1Q86U70 411 aaPredicted RBP13.89□□□□□ -0.19
HMGCL-203ENST00000374490 PIM3Q86V86 326 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 LGI2Q8N0V4 545 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 NKAPQ8N5F7 415 aaKnown RBP13.89□□□□□ -0.19
HMGCL-203ENST00000374490 TWIST2Q8WVJ9 160 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 LPGAT1Q92604 370 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 ZUFSPQ96AP4 578 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 TRIB3Q96RU7 358 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 ATOH8Q96SQ7 321 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 MUC13Q9H3R2 512 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 PIDD1Q9HB75 910 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 IL23AQ9NPF7 189 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 POLR3BQ9NW08 1133 aaPredicted RBP13.89□□□□□ -0.19
HMGCL-203ENST00000374490 GID8Q9NWU2 228 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 TAS2R13Q9NYV9 303 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 UBA2Q9UBT2 640 aaPredicted RBP13.89□□□□□ -0.19
HMGCL-203ENST00000374490 MSRAQ9UJ68 235 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 CRYL1Q9Y2S2 319 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 ARL5AQ9Y689 179 aa13.89□□□□□ -0.19
HMGCL-203ENST00000374490 MRPL42Q9Y6G3 142 aaKnown RBP13.89□□□□□ -0.19
HMGCL-203ENST00000374490 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-203ENST00000374490 LCHNA4D1U4 455 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 TBKBP1A7MCY6 615 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 STX16O14662 325 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 ACSL4O60488 711 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 RNASEH2AO75792 299 aaKnown RBP13.88□□□□□ -0.19
HMGCL-203ENST00000374490 SMIM18P0DKX4 95 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 GFAPP14136 432 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 CD9P21926 228 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 RFC2P35250 354 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 PBX2P40425 430 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 SLC11A2P49281 568 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 GATMP50440 423 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 CDH4P55283 916 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms