RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 BOLA3Q53S33 107 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 COLEC12Q5KU26 742 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 ANKS6Q68DC2 871 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 TXNRD3NBQ6F5E7 133 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 MARK2Q7KZI7 788 aaKnown RBP13.71□□□□□ -0.21
CXCL12-202ENST00000374426 FAM129CQ86XR2 697 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 PTRH1Q86Y79 214 aaKnown RBP13.71□□□□□ -0.21
CXCL12-202ENST00000374426 SFRP1Q8N474 314 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 ZNF564Q8TBZ8 553 aaPredicted RBP13.71□□□□□ -0.21
CXCL12-202ENST00000374426 HSPH1Q92598 858 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 AGAP2Q99490 1192 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 SPRY4Q9C004 299 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 AIPL1Q9NZN9 384 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 PILRAQ9UKJ1 303 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 PCYT1BQ9Y5K3 369 aaPredicted RBP13.71□□□□□ -0.21
CXCL12-202ENST00000374426 SCINQ9Y6U3 715 aa13.71□□□□□ -0.21
CXCL12-202ENST00000374426 ZFC3H1O60293 1989 aaKnown RBP13.71□□□□□ -0.22
CXCL12-202ENST00000374426 MAP3K6O95382 1288 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 RARAP10276 462 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 PRKCIP41743 596 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 RAB15P59190 212 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 LRP8Q14114 963 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 IHHQ14623 411 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-202ENST00000374426 DCAF12Q5T6F0 453 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 ZNF765Q7L2R6 523 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 NLRP8Q86W28 1048 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 GALNT13Q8IUC8 556 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 TEX26Q8N6G2 289 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 NSMCE1Q8WV22 266 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 COX14Q96I36 57 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 SLC45A3Q96JT2 553 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 SLC38A3Q99624 504 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 PCDH18Q9HCL0 1135 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 NT5MQ9NPB1 228 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
CXCL12-202ENST00000374426 MYO1AQ9UBC5 1043 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 TUBD1Q9UJT1 453 aa13.7□□□□□ -0.22
CXCL12-202ENST00000374426 A0A0J9YYE9 177 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 ZNF891A8MT65 544 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-202ENST00000374426 DUX1O43812 170 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 TRBC1P01850 177 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 MYBL1P10243 752 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 ZNF30P17039 623 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 SERPINB6P35237 376 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 STC1P52823 247 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 SKIDA1Q1XH10 827 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 WDR74Q6RFH5 385 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-202ENST00000374426 ARHGAP22Q7Z5H3 698 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 NRSN1Q8IZ57 195 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 OR10G6Q8NH81 332 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 EXD1Q8NHP7 514 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 RTP4Q96DX8 246 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 AHCYL2Q96HN2 611 aaKnown RBP13.69□□□□□ -0.22
CXCL12-202ENST00000374426 TEFMQ96QE5 360 aaKnown RBP13.69□□□□□ -0.22
CXCL12-202ENST00000374426 CTRCQ99895 268 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 RIOK2Q9BVS4 552 aaKnown RBP13.69□□□□□ -0.22
CXCL12-202ENST00000374426 ZMYND15Q9H091 742 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 ISCUQ9H1K1 167 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 EPN3Q9H201 632 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 MRPL47Q9HD33 250 aaKnown RBP13.69□□□□□ -0.22
CXCL12-202ENST00000374426 PRKAB1Q9Y478 270 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 TEX15Q9BXT5 2789 aa13.69□□□□□ -0.22
CXCL12-202ENST00000374426 UTP20O75691 2785 aaKnown RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 RP1L1Q8IWN7 2480 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 A8MU76 341 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 INPP4BO15327 924 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 CAPN5O15484 640 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 NKX2-8O15522 239 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 DNAJC6O75061 913 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 ATP1A1P05023 1023 aaKnown RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 PYGLP06737 847 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 IL4RP24394 825 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 CCR10P46092 362 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 MC2RQ01718 297 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 SLC25A11Q02978 314 aaKnown RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 HHEXQ03014 270 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 KLHL30Q0D2K2 578 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 SNAP47Q5SQN1 464 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 ALG1LQ6GMV1 187 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 TIPARPQ7Z3E1 657 aaKnown RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 UNC5BQ8IZJ1 945 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 NLGN4XQ8N0W4 816 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 NDUFAF2Q8N183 169 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 NLGN4YQ8NFZ3 816 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 TEKT4Q8WW24 435 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 TRIM11Q96F44 468 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 CATSPER2Q96P56 530 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 POLR1EQ9GZS1 481 aaKnown RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 GPN2Q9H9Y4 310 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 SARS2Q9NP81 518 aaKnown RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 TBC1D29Q9UFV1 150 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 ZNHIT2Q9UHR6 403 aa13.68□□□□□ -0.22
CXCL12-202ENST00000374426 CNOT6Q9ULM6 557 aaKnown RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 OAS3Q9Y6K5 1087 aaKnown RBP13.68□□□□□ -0.22
CXCL12-202ENST00000374426 LOC101059948A0A1B0GTJ6 334 aa13.67□□□□□ -0.22
CXCL12-202ENST00000374426 A6NCN8 305 aa13.67□□□□□ -0.22
CXCL12-202ENST00000374426 MFSD11O43934 449 aa13.67□□□□□ -0.22
CXCL12-202ENST00000374426 CLDN7O95471 211 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms