RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 TAS2R13Q9NYV9 303 aa16.82■□□□□ 0.28
PTPN20-203ENST00000374342 HAO1Q9UJM8 370 aa16.82■□□□□ 0.28
PTPN20-203ENST00000374342 MED16Q9Y2X0 877 aa16.82■□□□□ 0.28
PTPN20-203ENST00000374342 A8MT66 165 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 NIPSNAP2O75323 286 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 PKMP14618 531 aaKnown RBP16.81■□□□□ 0.28
PTPN20-203ENST00000374342 ARSAP15289 507 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 CD1DP15813 335 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 KCNA5P22460 613 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 SKIV2L2P42285 1042 aaKnown RBP16.81■□□□□ 0.28
PTPN20-203ENST00000374342 CDKN3Q16667 212 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 LRRC73Q5JTD7 316 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 SPDYAQ5MJ70 313 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 OR2A12Q8NGT7 310 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 BPIFB1Q8TDL5 484 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 FGF13Q92913 245 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 KLHL29Q96CT2 875 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 ASB16Q96NS5 453 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 BIRC8Q96P09 236 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 DZANK1Q9NVP4 752 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 DNAJC28Q9NX36 388 aa16.81■□□□□ 0.28
PTPN20-203ENST00000374342 MUC22E2RYF6 1773 aaPredicted RBP16.81■□□□□ 0.28
PTPN20-203ENST00000374342 CEP290O15078 2479 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 TTC34A8MYJ7 566 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 GAPDHSO14556 408 aaPredicted RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 VPS26AO75436 327 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 ITGALP20701 1170 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 KCNC3Q14003 757 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 CTC1Q2NKJ3 1217 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 ARL13AQ5H913 290 aaPredicted RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 LRRC66Q68CR7 880 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 PAQR3Q6TCH7 311 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 TRIM67Q6ZTA4 783 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 KIF2BQ8N4N8 673 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 SMARCD2Q92925 531 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 MRGPRX3Q96LB0 322 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 TMEM237Q96Q45 408 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 SHCBP1LQ9BZQ2 653 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 STN1Q9H668 368 aaKnown RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 ARMCX1Q9P291 453 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 RAP2CQ9Y3L5 183 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 F8W8V4 182 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 H3BMM5 538 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 RFXAPO00287 272 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 HOXC11O43248 304 aaPredicted RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 DIAPH2O60879 1101 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 ALOX15P16050 662 aaPredicted RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 BPIP17213 487 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 SPAM1P38567 509 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 PTGER3P43115 390 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 ALDH18A1P54886 795 aaKnown RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 DNAJB13P59910 316 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 RAB30Q15771 203 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 VWA5B1Q5TIE3 1220 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 CRTC1Q6UUV9 634 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 GDPD4Q6W3E5 623 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 STK40Q8N2I9 435 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 CCDC126Q96EE4 140 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 ZNF641Q96N77 438 aaPredicted RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 KLHL32Q96NJ5 620 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 ILKAPQ9H0C8 392 aaPredicted RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 EBF3Q9H4W6 596 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 ASB8Q9H765 288 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 SLC28A3Q9HAS3 691 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 NCKIPSDQ9NZQ3 722 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 GALPQ9UBC7 116 aa16.8■□□□□ 0.28
PTPN20-203ENST00000374342 TRMT6Q9UJA5 497 aaKnown RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 OAS3Q9Y6K5 1087 aaKnown RBP16.8■□□□□ 0.28
PTPN20-203ENST00000374342 GLYATL1P3A0A0U1RQE8 302 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.79■□□□□ 0.28
PTPN20-203ENST00000374342 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.79■□□□□ 0.28
PTPN20-203ENST00000374342 CFAP73A6NFT4 308 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 E5RI56 91 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 NPHS1O60500 1241 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 TULP3O75386 442 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 ATP5HO75947 161 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 IPO13O94829 963 aaKnown RBP16.79■□□□□ 0.28
PTPN20-203ENST00000374342 PAPLNO95428 1278 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 PYGLP06737 847 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 NNMTP40261 264 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 IDH3AP50213 366 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 OR4D1Q15615 310 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 SETMARQ53H47 684 aaPredicted RBP16.79■□□□□ 0.28
PTPN20-203ENST00000374342 TPRG1Q6ZUI0 275 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 PIWIL4Q7Z3Z4 852 aaKnown RBP16.79■□□□□ 0.28
PTPN20-203ENST00000374342 SNX20Q7Z614 316 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 ISCA2Q86U28 154 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 SERPINA9Q86WD7 417 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 SIDT2Q8NBJ9 832 aaKnown RBP16.79■□□□□ 0.28
PTPN20-203ENST00000374342 PHF21BQ96EK2 531 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 CCDC97Q96F63 343 aaPredicted RBP16.79■□□□□ 0.28
PTPN20-203ENST00000374342 LYSMD1Q96S90 227 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 SYTL2Q9HCH5 934 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 SLC40A1Q9NP59 571 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 SARS2Q9NP81 518 aaKnown RBP16.79■□□□□ 0.28
PTPN20-203ENST00000374342 SAR1AQ9NR31 198 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 ARL8BQ9NVJ2 186 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 FBXO10Q9UK96 956 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 APPL1Q9UKG1 709 aa16.79■□□□□ 0.28
PTPN20-203ENST00000374342 LAMA3Q16787 3333 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms