RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 STK40Q8N2I9 435 aa24.89■■□□□ 1.57
CTSA-203ENST00000372459 GIMAP7Q8NHV1 300 aa24.89■■□□□ 1.57
CTSA-203ENST00000372459 BIRC8Q96P09 236 aa24.89■■□□□ 1.57
CTSA-203ENST00000372459 MARK1Q9P0L2 795 aa24.89■■□□□ 1.57
CTSA-203ENST00000372459 VTI1BQ9UEU0 232 aa24.89■■□□□ 1.57
CTSA-203ENST00000372459 FAM50BQ9Y247 325 aa24.89■■□□□ 1.57
CTSA-203ENST00000372459 WNT6Q9Y6F9 365 aa24.89■■□□□ 1.57
CTSA-203ENST00000372459 HDAC3O15379 428 aa24.88■■□□□ 1.57
CTSA-203ENST00000372459 PKMP14618 531 aaKnown RBP24.88■■□□□ 1.57
CTSA-203ENST00000372459 HNF1BP35680 557 aa24.88■■□□□ 1.57
CTSA-203ENST00000372459 PTGER3P43115 390 aa24.88■■□□□ 1.57
CTSA-203ENST00000372459 CBX2Q14781 532 aaPredicted RBP24.88■■□□□ 1.57
CTSA-203ENST00000372459 PTERQ96BW5 349 aa24.88■■□□□ 1.57
CTSA-203ENST00000372459 TBC1D10AQ9BXI6 508 aa24.88■■□□□ 1.57
CTSA-203ENST00000372459 CYP4F12Q9HCS2 524 aa24.88■■□□□ 1.57
CTSA-203ENST00000372459 ZDHHC2Q9UIJ5 367 aa24.88■■□□□ 1.57
CTSA-203ENST00000372459 MED16Q9Y2X0 877 aa24.88■■□□□ 1.57
CTSA-203ENST00000372459 COMMD10Q9Y6G5 202 aa24.88■■□□□ 1.57
CTSA-203ENST00000372459 KCNA5P22460 613 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 ADARP55265 1226 aaKnown RBP24.87■■□□□ 1.57
CTSA-203ENST00000372459 ERVK-21P61565 698 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 CARD16Q5EG05 197 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 C9orf50Q5SZB4 431 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 TREML1Q86YW5 311 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 RHEBL1Q8TAI7 183 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 FAM136AQ96C01 138 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 CPEB1Q9BZB8 566 aaKnown RBP24.87■■□□□ 1.57
CTSA-203ENST00000372459 NOP53Q9NZM5 478 aaKnown RBP24.87■■□□□ 1.57
CTSA-203ENST00000372459 BNIP3LO60238 219 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 SMIM24O75264 130 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 VPS26AO75436 327 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 CD9P21926 228 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 RAD51Q06609 339 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 CDKN3Q16667 212 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 CERS6Q6ZMG9 384 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 PHF21BQ96EK2 531 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 BTBD10Q9BSF8 475 aa24.87■■□□□ 1.57
CTSA-203ENST00000372459 TFB2MQ9H5Q4 396 aaKnown RBP24.87■■□□□ 1.57
CTSA-203ENST00000372459 GEMIN8Q9NWZ8 242 aaKnown RBP24.87■■□□□ 1.57
CTSA-203ENST00000372459 OAS3Q9Y6K5 1087 aaKnown RBP24.87■■□□□ 1.57
CTSA-203ENST00000372459 OR1I1O60431 355 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 POP4O95707 220 aaKnown RBP24.86■■□□□ 1.57
CTSA-203ENST00000372459 ENO1P06733 434 aaKnown RBP24.86■■□□□ 1.57
CTSA-203ENST00000372459 PPARGP37231 505 aaPredicted RBP24.86■■□□□ 1.57
CTSA-203ENST00000372459 CCNHP51946 323 aaPredicted RBP24.86■■□□□ 1.57
CTSA-203ENST00000372459 NFKB2Q00653 900 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 UBAP2LQ14157 1087 aaKnown RBP24.86■■□□□ 1.57
CTSA-203ENST00000372459 SLC9B1Q4ZJI4 515 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 TLDC1Q6P9B6 456 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 PAQR3Q6TCH7 311 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 ADGRD2Q7Z7M1 963 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 ADIPOR2Q86V24 386 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 AHI1Q8N157 1196 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 CELF5Q8N6W0 485 aaKnown RBP24.86■■□□□ 1.57
CTSA-203ENST00000372459 SMG7Q92540 1137 aaKnown RBP24.86■■□□□ 1.57
CTSA-203ENST00000372459 LYSMD1Q96S90 227 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 GPR21Q99679 349 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 SLC2A11Q9BYW1 496 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 DERL2Q9GZP9 239 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 SUV39H2Q9H5I1 410 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 EML4Q9HC35 981 aaKnown RBP24.86■■□□□ 1.57
CTSA-203ENST00000372459 TAGLN3Q9UI15 199 aa24.86■■□□□ 1.57
CTSA-203ENST00000372459 PRR5-ARHGAP8B1AHC4 643 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 CLDN7O95471 211 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 ESR1P03372 595 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 TPBGLP0DKB5 382 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 AOC1P19801 751 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 KCNC1P48547 511 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 ARHGAP8P85298 464 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 SETMARQ53H47 684 aaPredicted RBP24.85■■□□□ 1.57
CTSA-203ENST00000372459 CTSL3PQ5NE16 218 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 ZSWIM9Q86XI8 627 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 NKAPQ8N5F7 415 aaKnown RBP24.85■■□□□ 1.57
CTSA-203ENST00000372459 ITFG1Q8TB96 612 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 MAPK15Q8TD08 544 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 UTP4Q969X6 686 aaKnown RBP24.85■■□□□ 1.57
CTSA-203ENST00000372459 ECHDC3Q96DC8 303 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 SHCBP1LQ9BZQ2 653 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 SLCO3A1Q9UIG8 710 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 APPL1Q9UKG1 709 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 GBF1Q92538 1859 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 A8MUI8 341 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 IMPDH1P20839 514 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 ATP6V0D1P61421 351 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 FAM151BQ6UXP7 276 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 KIAA0907Q7Z7F0 614 aaPredicted RBP24.85■■□□□ 1.57
CTSA-203ENST00000372459 LONP2Q86WA8 852 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 STON2Q8WXE9 905 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 KCNJ9Q92806 393 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 VOPP1Q96AW1 172 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 ZDHHC6Q9H6R6 413 aa24.85■■□□□ 1.57
CTSA-203ENST00000372459 H3BMM5 538 aa24.84■■□□□ 1.57
CTSA-203ENST00000372459 PRAMEF1O95521 474 aa24.84■■□□□ 1.57
CTSA-203ENST00000372459 BMP1P13497 986 aa24.84■■□□□ 1.57
CTSA-203ENST00000372459 METTL21CQ5VZV1 264 aa24.84■■□□□ 1.57
CTSA-203ENST00000372459 DPY19L3Q6ZPD9 716 aa24.84■■□□□ 1.57
CTSA-203ENST00000372459 KIAA1191Q96A73 305 aa24.84■■□□□ 1.57
CTSA-203ENST00000372459 L3HYPDHQ96EM0 354 aa24.84■■□□□ 1.57
CTSA-203ENST00000372459 ZNF641Q96N77 438 aaPredicted RBP24.84■■□□□ 1.57
CTSA-203ENST00000372459 TTC1Q99614 292 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms