RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 GFRA2O00451 464 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 SNAP91O60641 907 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 RPP40O75818 363 aaKnown RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 PRKAA2P54646 552 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 EPHB3P54753 998 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 CCNIQ14094 377 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 SLC9B1Q4ZJI4 515 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 TXNDC8Q6A555 127 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 PATL1Q86TB9 770 aaKnown RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 ARL10Q8N8L6 244 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 TXNDC5Q8NBS9 432 aaKnown RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 ICA1LQ8NDH6 482 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 GPR150Q8NGU9 434 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 SGF29Q96ES7 293 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 SMIM14Q96QK8 99 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 MUC3BQ9H195 1237 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 MAN1C1Q9NR34 630 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 MRPL17Q9NRX2 175 aaKnown RBP12.79□□□□□ -0.36
GPC3-201ENST00000370818 RIMKLBQ9ULI2 386 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 CRYL1Q9Y2S2 319 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 RAP2CQ9Y3L5 183 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 CEPT1Q9Y6K0 416 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 AK5Q9Y6K8 562 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 ANAPC1Q9H1A4 1944 aa12.79□□□□□ -0.36
GPC3-201ENST00000370818 MATN2O00339 956 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 CASQ2O14958 399 aaPredicted RBP12.78□□□□□ -0.36
GPC3-201ENST00000370818 CD3EAPO15446 510 aaKnown RBP12.78□□□□□ -0.36
GPC3-201ENST00000370818 DNAJA2O60884 412 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 ZMPSTE24O75844 475 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 PIGNO95427 931 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 OLFM2O95897 454 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 TIMP1P01033 207 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 ACRP10323 421 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 MYL4P12829 197 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 PMLP29590 882 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 HALP42357 657 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 RELAQ04206 551 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 FAM83EQ2M2I3 478 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 PDCD4Q53EL6 469 aaKnown RBP12.78□□□□□ -0.36
GPC3-201ENST00000370818 TECRLQ5HYJ1 363 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 TMEM53Q6P2H8 277 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 ZNF549Q6P9A3 640 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 PAOXQ6QHF9 649 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 LINGO4Q6UY18 593 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 HERC6Q8IVU3 1022 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 ARL14EPQ8N8R7 260 aaPredicted RBP12.78□□□□□ -0.36
GPC3-201ENST00000370818 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 ITGB1BP2Q9UKP3 347 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 TMED5Q9Y3A6 229 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 NEMP2A6NFY4 417 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 CAPN8A6NHC0 703 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 GLP2RO95838 553 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 CDH2P19022 906 aaPredicted RBP12.78□□□□□ -0.36
GPC3-201ENST00000370818 KCNA5P22460 613 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 MZF1P28698 734 aaPredicted RBP12.78□□□□□ -0.36
GPC3-201ENST00000370818 TIAL1Q01085 375 aaKnown RBP eCLIP12.78□□□□□ -0.361e-7■■■■■ 45.2
GPC3-201ENST00000370818 Q6ZNB5 142 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 PIM3Q86V86 326 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 TSPAN17Q96FV3 270 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 SCUBE2Q9NQ36 999 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 ZNHIT2Q9UHR6 403 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 ZDHHC2Q9UIJ5 367 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 PCDHGC4Q9Y5F7 938 aa12.78□□□□□ -0.36
GPC3-201ENST00000370818 HEMK1Q9Y5R4 338 aaPredicted RBP12.78□□□□□ -0.36
GPC3-201ENST00000370818 TBL1XO60907 577 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 PRSS56P0CW18 603 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 TFEBP19484 476 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 RPL14P50914 215 aaKnown RBP12.77□□□□□ -0.36
GPC3-201ENST00000370818 CCR3P51677 355 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 ZNF140P52738 457 aaPredicted RBP12.77□□□□□ -0.36
GPC3-201ENST00000370818 ZNF362Q5T0B9 420 aaPredicted RBP12.77□□□□□ -0.36
GPC3-201ENST00000370818 MDGA1Q8NFP4 955 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 OR4L1Q8NH43 312 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 WFDC5Q8TCV5 224 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 CDKN2AIPNLQ96HQ2 116 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 PAWRQ96IZ0 340 aaKnown RBP12.77□□□□□ -0.36
GPC3-201ENST00000370818 OR52B2Q96RD2 323 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 MRPL1Q9BYD6 325 aaKnown RBP12.77□□□□□ -0.36
GPC3-201ENST00000370818 SHCBP1LQ9BZQ2 653 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 FAF1Q9UNN5 650 aaPredicted RBP12.77□□□□□ -0.36
GPC3-201ENST00000370818 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.36
GPC3-201ENST00000370818 OR51B4Q9Y5P0 310 aa12.77□□□□□ -0.36
GPC3-201ENST00000370818 GRID2O43424 1007 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 CCNT2O60583 730 aaKnown RBP12.77□□□□□ -0.37
GPC3-201ENST00000370818 CBFA2T3O75081 653 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 LATS1O95835 1130 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 LTA4HP09960 611 aaKnown RBP12.77□□□□□ -0.37
GPC3-201ENST00000370818 ATP5F1P24539 256 aaPredicted RBP12.77□□□□□ -0.37
GPC3-201ENST00000370818 DNAJB13P59910 316 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 SLC25A3Q00325 362 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 MYBPC1Q00872 1141 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 PFKPQ01813 784 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 BTKQ06187 659 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 NSUN2Q08J23 767 aaKnown RBP eCLIP12.77□□□□□ -0.37
GPC3-201ENST00000370818 PRKAA1Q13131 559 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 APOFQ13790 326 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 AGAP9Q5VTM2 703 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 ZNF783Q6ZMS7 281 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 GAREM2Q75VX8 874 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms